Factsheet for PGSC0003DMT400046268

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55550.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT1G55550.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g049830.2.1	Tomato	mitochondrion	71.54	72.09
HORVU3Hr1G036020.11	Barley	cytosol	66.15	15.93
PGSC0003DMT400057842	Potato	nucleus	60.77	12.52
CDY50030	Canola	cytosol	73.08	11.98
CDY54364	Canola	cytosol	72.31	11.87
Bra030851.1-P	Field mustard	nucleus	71.54	11.16
CDY56014	Canola	nucleus	71.54	11.12
AT1G55550.1	Thale cress	cytosol	73.08	11.06
CDY10550	Canola	cytosol	70.77	10.99
OQU86633	Sorghum	cytosol	66.15	10.44
TraesCS3D01G183100.2	Wheat	cytosol	66.15	10.35
TraesCS3B01G207300.1	Wheat	cytosol	66.15	10.35
TraesCS3A01G177700.1	Wheat	cytosol	66.15	10.35
Zm00001d040312_P007	Maize	cytosol	66.15	10.29
GSMUA_Achr8P21500_001	Banana	cytosol	66.92	9.74
Bra038000.1-P	Field mustard	cytosol	41.54	7.23
PGSC0003DMT400080666	Potato	cytosol	1.54	1.15
Os01t0260100-01	Rice	cytosol	1.54	1.02
PGSC0003DMT400045963	Potato	cytosol	0.0	0.0
VIT_06s0004g00050.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.850.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1BIV9	InterPro:P-loop_NTPase	PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG402017962
PGSC:PGSC0003DMG402017962	EnsemblPlants:PGSC0003DMT400046268	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF391
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002960325	:	:	:

Description

ATP binding / microtubule motor [Source:PGSC_GENE;Acc:PGSC0003DMG402017962]

Coordinates

chr1:-:24039822..24042156

Molecular Weight (calculated)

14683.9 Da

IEP (calculated)

10.723

GRAVY (calculated)

-0.429

Length

130 amino acids

Sequence
(BLAST)

001: MIRISISSVS ASKRRRLTNK LWMVDLGGSE RVLKTKALGR RFEEGKAINL SLSSLGDVIH ALQSKKRHIP YRNSKLTQVL KDSLGDDSKT LMLVHVSPHE
101: EDLCETLCTL NFATRAKRVQ LRNEESTVSH

Best Arabidopsis Sequence Match ( AT1G55550.1 )
(BLAST)

001: MERTRSKPVR NLPETIHSLL GLKSHMTSDW VKSVCNIAKN TSSTSKKEED DFVSVDLQSI RDQLSALTVQ VNDQNKLRRQ ILNEFLDLKG NIRVFCRVKP
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK

Arabidopsis Description

KIN14TKinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.