Factsheet for Solyc01g049830.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55550.1	Solyc07g065490.2.1	AT4G26630.1	25387881
AT1G55550.1	Solyc10g006000.2.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046268	Potato	mitochondrion	72.09	71.54
HORVU3Hr1G036020.11	Barley	cytosol	53.49	12.78
Solyc01g098080.2.1	Tomato	nucleus	50.39	10.3
CDY54364	Canola	cytosol	58.14	9.47
CDY50030	Canola	cytosol	58.14	9.46
Bra030851.1-P	Field mustard	nucleus	56.59	8.76
CDY56014	Canola	nucleus	56.59	8.73
AT1G55550.1	Thale cress	cytosol	58.14	8.73
CDY10550	Canola	cytosol	55.81	8.6
OQU86633	Sorghum	cytosol	54.26	8.5
TraesCS3D01G183100.2	Wheat	cytosol	53.49	8.3
TraesCS3B01G207300.1	Wheat	cytosol	53.49	8.3
TraesCS3A01G177700.1	Wheat	cytosol	53.49	8.3
Zm00001d040312_P007	Maize	cytosol	53.49	8.25
GSMUA_Achr8P21500_001	Banana	cytosol	56.59	8.17
Bra038000.1-P	Field mustard	cytosol	27.91	4.82
Solyc01g049840.1.1	Tomato	cytosol	6.98	4.09
Solyc11g010560.1.1	Tomato	cytosol, nucleus	33.33	3.26
Os01t0260100-01	Rice	cytosol	0.0	0.0
VIT_06s0004g00050.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.850.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	UniProt:K4AVG3
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF391	SMART:SM00129	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc01g049830.2
EnsemblPlants:Solyc01g049830.2.1	UniParc:UPI0002763365	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:46664962..46668601

Molecular Weight (calculated)

14602.1 Da

IEP (calculated)

10.284

GRAVY (calculated)

-0.050

Length

129 amino acids

Sequence
(BLAST)

001: MIRIYISSIS AGKRRRLTNK LWMVDLGGSE RVLKTKALGR RFEEGKSINL SLSSLGDVIH ALQSKKRHIP YRSFTISSKL ILILILMFTV DKNSKLTQVL
101: KDSLGDDSKT LMLVHVCPHE EDLCETLCT

Best Arabidopsis Sequence Match ( AT1G55550.1 )
(BLAST)

001: MERTRSKPVR NLPETIHSLL GLKSHMTSDW VKSVCNIAKN TSSTSKKEED DFVSVDLQSI RDQLSALTVQ VNDQNKLRRQ ILNEFLDLKG NIRVFCRVKP
101: LGATEKLRPP VASDTRNVII KLSETKRKTY NFDRVFQPDS SQDDVFLEIE PVIKSVIDGY NACIFAYGQT GTGKTYTMEG LPNSPGIVPR AIKGLFKQVE
201: ESNHMFTIHF SMLEIYMGNL KDLLLSEATK PISPIPPSLS IHTDPNGEID IENLVKLKVD DFNEILRLYK VGCRSRATAS TNSNSVSSRS HCMIRVSVTS
301: LGAPERRRET NKIWLVDLGG SERVLKTRAT GRRFDEGKAI NLSLSALGDV INSLQRKNSH IPYRNSKLTQ VLKDSLGQDS KTLMLVHISP KEDDLCETIC
401: SLNFATRAKN IHLGQDESTE EQAKKEAVMM NLQKMMEKIE QEREMSLRKM RNLNETLEKL TGKPHVIEEE EKDVVREVIH VTPKKPRNKS RRASDVFPSF
501: MRPTASSNRR LSGADFSVTP NSSSFKSRRN SMISVRAESA CLPVKKKKNR FDSACDSSDR SVSKSTSIMR QNTADDATVY SQDISECDIK LVVSEHKPKP
601: LQMGPGSATK SRSNISNFEK DVMQKIGGTE FSRINSWLRS QSENRSYVLD KTQLPATHFL ENLNRSLEKS PTQSFTTEKI TGNELEGIEE TKTNETVVNP
701: TLMLKKLFEL QCLCSAEEED QILSRFPIPG YEDDDESRYP PILENDGFSQ HIDNEWFGVN NYSADWERDS PATIPLLECE PDLKQLLPEL GLDRSLKPRG
801: LAVAEGAAPP LLRAQETLGE RGKGPTFMQK LQALCFRILL GLGFMDVGFG NDFFNGLTK

Arabidopsis Description

KIN14TKinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.