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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • cytosol 1
  • vacuole 7
  • extracellular 4
  • endoplasmic reticulum 5
  • plasma membrane 5
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER89592 Sorghum plasma membrane 98.82 98.82
Zm00001d045139_P002 Maize plastid 97.38 97.51
Os06t0178900-01 Rice plasma membrane 95.41 94.92
TraesCS7B01G042600.1 Wheat golgi 92.79 92.91
TraesCS7D01G142600.2 Wheat plastid 92.66 92.9
TraesCS7A01G141300.2 Wheat plasma membrane 90.69 92.89
EES06395 Sorghum plasma membrane 88.86 88.51
EES07699 Sorghum plasma membrane 87.68 88.14
OQU76770 Sorghum plasma membrane 88.99 84.66
HORVU4Hr1G033720.1 Barley golgi, plasma membrane, vacuole 31.98 82.99
EES00707 Sorghum plasma membrane 78.37 77.26
EES19071 Sorghum plasma membrane 74.44 73.58
EES17335 Sorghum plasma membrane 36.96 35.29
Protein Annotations
KEGG:00190+3.6.1.1MapMan:24.1.4.1UniProt:A0A194YHK2GO:GO:0003674GO:GO:0003824GO:GO:0004427
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009678GO:GO:0015992
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0055085GO:GO:1902600EnsemblPlants:KXG19445
ProteinID:KXG19445ProteinID:KXG19445.1HAMAP:MF_01129PFAM:PF03030PIRSF:PIRSF001265InterPro:PPase-energised_H-pump
PANTHER:PTHR31998PANTHER:PTHR31998:SF19MetaCyc:PWY-7805MetaCyc:PWY-7807EnsemblPlantsGene:SORBI_3010G060600TIGRFAMs:TIGR01104
TMHMM:TMhelixUniParc:UPI000220730FSEG:seg:::
Description
hypothetical protein
Coordinates
chr10:+:4772106..4777457
Molecular Weight (calculated)
79760.2 Da
IEP (calculated)
4.952
GRAVY (calculated)
0.618
Length
763 amino acids
Sequence
(BLAST)
001: MAILSPLATE VFIPVAAVIG IVFAVVQWVL VSRVKLSPTA AAASGGGKNG YGDYLIEEEE GLNDHNVVVK CAEIQNAISE GATSFLFTEY QYVGIFMSIF
101: AVVIFLFLGS VEGFSTKSQP CTYSKDKYCK PALFTALFST VSFLLGAITS LVSGFLGMKI ATYANARTTL EARKGVGKAF ITAFRSGAVM GFLLASSGLV
201: VLYITINVFK LYYGDDWEGL FESITGYGLG GSSMALFGRV GGGIYTKAAD VGADLVGKVE RNIPEDDPRN PAVIADNVGD NVGDIAGMGS DLFGSYAESS
301: CAALVVASIS SFGIDHDFTG MCYPLLVSSV GIIVCLITTL FATDFFEVKA VKEIEPALKK QLIISTALMT VGIAVISWLA LPAKFTIYNF GTQKDVSNWG
401: LFFCVAIGLW AGLIIGFVTE YYTSNAYSPV QDVADSCRTG AATNVIFGLA LGYKSVIIPI FAIAVSIYVS FSIAAMYGIA VAALGMLSTI ATGLAIDAYG
501: PISDNAGGIA EMAGMSHRIR ERTDALDAAG NTTAAIGKGF AIGSAALVSL ALFGAFVSRA GVTVVDVLSP KVFIGLIVGA MLPYWFSAMT MKSVGSAALK
601: MVEEVRRQFN TIPGLMEGTA KPDYATCVKI STDASIKEMI PPGALVMLTP LIVGTLFGVE TLSGVLAGAL VSGVQIAISA SNTGGAWDNA KKYIEAGASE
701: HARTLGPKGS DCHKAAVIGD TIGDPLKDTS GPSLNILIKL MAVESLVFAP FFATQGGILF KYL
Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.