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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 7
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009222_P001 Maize plasma membrane 96.9 93.87
TraesCS1A01G253600.1 Wheat golgi 89.28 89.39
Os01t0337500-00 Rice plasma membrane 88.76 88.87
TraesCS1B01G264600.1 Wheat plasma membrane 88.89 88.77
TraesCS1D01G253200.1 Wheat plasma membrane 88.76 88.65
HORVU1Hr1G061140.3 Barley golgi, mitochondrion, plasma membrane 89.02 83.52
KXG19445 Sorghum endoplasmic reticulum, plasma membrane, vacuole 77.26 78.37
VIT_14s0060g01280.t01 Wine grape golgi, plasma membrane, vacuole 76.74 78.26
EER89592 Sorghum plasma membrane 76.74 77.85
EES07699 Sorghum plasma membrane 76.1 77.6
KRG90549 Soybean endoplasmic reticulum, plasma membrane, vacuole 75.97 77.06
PGSC0003DMT400007173 Potato plasma membrane 75.45 76.74
GSMUA_Achr8P06450_001 Banana endoplasmic reticulum, plasma membrane, vacuole 75.71 76.6
EES06395 Sorghum plasma membrane 75.19 75.98
Solyc01g100390.2.1 Tomato nucleus, plastid, unclear 74.68 75.95
EES19071 Sorghum plasma membrane 75.58 75.78
OQU76770 Sorghum plasma membrane 74.81 72.19
KRH33828 Soybean endoplasmic reticulum 66.93 71.84
EES17335 Sorghum plasma membrane 37.34 36.17
Protein Annotations
KEGG:00190+3.6.1.1MapMan:24.1.4.1EntrezGene:8075312UniProt:C5XJS6EnsemblPlants:EES00707ProteinID:EES00707
ProteinID:EES00707.1GO:GO:0003674GO:GO:0003824GO:GO:0004427GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0009678GO:GO:0015992GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0055085GO:GO:1902600HAMAP:MF_01129PFAM:PF03030PIRSF:PIRSF001265
InterPro:PPase-energised_H-pumpPANTHER:PTHR31998PANTHER:PTHR31998:SF9MetaCyc:PWY-7805MetaCyc:PWY-7807EnsemblPlantsGene:SORBI_3003G155000
TIGRFAMs:TIGR01104TMHMM:TMhelixUniParc:UPI0001A8453CRefSeq:XP_002455587.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:+:16877483..16887696
Molecular Weight (calculated)
79871.7 Da
IEP (calculated)
6.125
GRAVY (calculated)
0.576
Length
774 amino acids
Sequence
(BLAST)
001: MGSAAAADVF IPACAAVGVA FALWQWFLVS RVKVSAYAAP GGNGHHGGPV FRIEDNEEDV GMGGGGDDDE EEGAGDGTVA VARCAEIQSA ISVGANSFLF
101: TQYKYLAAFT AIFAVVIFLF LGSVHRFSTD SRPCQYTSGR TCKPALANAV FSSVAFLLGA ATSVVSGYLG MRIATYANAR TTLEARRGVG AAFATAFRSG
201: AVMGFLLASL GLLVLYVTIK VFGLYYGDDW ESLYESITGY GLGGSSMALF GRVGGGIYTK AADVGADLVG KVERNIPEDD PRNPAVIADN VGDNVGDIAG
301: MGSDLFGSYA ESTCAALFVA SISSFGADHD FAAVAYPLLI SSAGLLVCLV TTLFATDLFK VKTVRGVAPA LKLQLVVSTV LMTVAALVVS LAALPANFTM
401: FDFGQVKQVK NWHLFFCVAI GLWAGLAIGF TTEYFTSNAY SPVRDVADSC RTGAATNVIF GLALGYKSVI VPVFAIAVSI YVGFTLASIY GIAVAALGML
501: STVATGLAID AYGPISDNAG GIAEMAGMSR RIRQRTDALD AAGNTTAAIG KGFAIGSAAL VSLALFGAFV SRAGITDVNV LNPKVFVGLL VGAMLPYWFS
601: AMTMKSVGSA ALKMVEEVRR QFIAIPGLME GRAAPDYARC VRISTDASLK EMMPPGALVL LAPLVAGTFF GVSTLAGLLA GALVSGVQIA ISASNSGGAW
701: DNAKKYIEAG ASDHAKSLGP KGSDAHKAAV IGDTIGDPLK DTSGPSLNIL IKLMAVESLV FAPFFAAHGG LIFK
Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.