CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
vacuole 6
endoplasmic reticulum 4
plasma membrane 6
golgi 5
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90549	Soybean	endoplasmic reticulum, plasma membrane, vacuole	91.68	86.63
KRH61103	Soybean	endoplasmic reticulum, plasma membrane	12.34	78.07
VIT_14s0060g01280.t01	Wine grape	golgi, plasma membrane, vacuole	81.69	77.6
PGSC0003DMT400007173	Potato	plasma membrane	81.28	77.0
Solyc01g100390.2.1	Tomato	nucleus, plastid, unclear	80.72	76.48
GSMUA_Achr8P06450_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	77.53	73.07
KRH44486	Soybean	endoplasmic reticulum	76.98	72.27
KRH47417	Soybean	nucleus	76.84	72.14
KRH20199	Soybean	nucleus	76.14	71.76
KRH03609	Soybean	plasma membrane	74.48	71.22
Os01t0337500-00	Rice	plasma membrane	72.26	67.4
EES00707	Sorghum	plasma membrane	71.84	66.93
TraesCS1A01G253600.1	Wheat	golgi	71.29	66.49
HORVU1Hr1G023100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	70.04	66.19
TraesCS1B01G124600.1	Wheat	golgi	69.9	65.97
TraesCS1B01G264600.1	Wheat	plasma membrane	70.87	65.94
TraesCS1D01G253200.1	Wheat	plasma membrane	70.87	65.94
Zm00001d037576_P001	Maize	plastid	69.9	65.88
TraesCS1D01G107600.1	Wheat	golgi	69.63	65.62
TraesCS1A01G107200.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	69.9	65.03
EES19071	Sorghum	plasma membrane	69.63	65.03
Zm00001d009222_P001	Maize	plasma membrane	71.84	64.83
Os05t0156900-01	Rice	plasma membrane	68.65	64.29
HORVU1Hr1G061140.3	Barley	golgi, mitochondrion, plasma membrane	71.15	62.18
KRH71586	Soybean	extracellular	9.85	50.71
KRH46977	Soybean	endoplasmic reticulum	34.67	31.21
KRH44688	Soybean	plasma membrane	34.54	31.09

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:24.1.4.1	EMBL:ACUP02006559	EnsemblPlantsGene:GLYMA_10G147500	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600
UniProt:I1LB52	EnsemblPlants:KRH33828	ProteinID:KRH33828	ProteinID:KRH33828.1	PFAM:PF03030	PIRSF:PIRSF001265
InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF24	MetaCyc:PWY-7805	MetaCyc:PWY-7807	TIGRFAMs:TIGR01104
TMHMM:TMhelix	UniParc:UPI0002964DB4	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:38304774..38308704

Molecular Weight (calculated)

75409.6 Da

IEP (calculated)

5.647

GRAVY (calculated)

0.492

Length

721 amino acids

Sequence
(BLAST)

001: MGVLSEGLTQ ILIPVTALIG IGFALLQWLL LSRVRVSSAD HTNADNGYRK SLIGDSELEN GVQSVEVTNN CAEIQHAISV VFGAIIFVFL GSVKGFSTQS
101: DPCTYNEGNI CKPALANAVF STVAFLLGAL NSVLSDFLGM KIATYANART TPEARKGIGK AFVTAFRSGP VMGFLLSANG LLVLYITINL LKLYYRDDWE
201: GLYESITGHG LGGLSMALFE RVGGGIYTKA ADFGADLVGN LNTVPEDDPR NPAVIVDNVG DNVGDIAGMG SDLFGSYAES SCAALFVASI SSFGTNHDYT
301: AMTYPLIISS MGIVVWLIAT LFATDLFEIT NVSQIEPSLK RQLLIATILI TAGIAIVSFT ALPSEFTLYN FGASKVVKNW HLFFCVAIGL LAGLGIGYIT
401: DPVQDVADSC RTGAATNLIF GLALGYKSVI IPVFAIAIAI HVSFSLAAMY GIGVAALGML STITTSLAID AYGPISDNGG GIAEMAGMRH KIRERTDALD
501: AAGNTTAAIG KGFAIGSAVL ASLALFGAYV SRAGIKTVNV MTPKVFIAMT MKSVGSAALK MVEEVRRQFN TIPGLLEGRE KPDYANCVKI STDASLKEMI
601: PPSALVLLTP LIAGTFFGVE NLAGVLAGSL VSGGVQVAIS DSNTGGAWDN AKKYIEAGTT PHDASLGPKG SNPHKAAVTV GDPLKDTSGP SLNILIKLMA
701: VESLLFAPFF AAHGGLIFKS F

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.