Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G124600.1 Wheat golgi 98.43 98.3
TraesCS1D01G107600.1 Wheat golgi 98.17 97.91
TraesCS1A01G107200.2 Wheat endoplasmic reticulum, plasma membrane, vacuole 98.82 97.29
HORVU7Hr1G031480.1 Barley cytosol, nucleus 9.31 92.21
Zm00001d037576_P001 Maize plastid 86.11 85.88
EES19071 Sorghum plasma membrane 85.98 84.97
Os05t0156900-01 Rice plasma membrane 84.53 83.77
GSMUA_Achr8P06450_001 Banana endoplasmic reticulum, plasma membrane, vacuole 78.24 78.04
VIT_14s0060g01280.t01 Wine grape golgi, plasma membrane, vacuole 77.59 78.0
PGSC0003DMT400007173 Potato plasma membrane 77.46 77.66
Solyc01g100390.2.1 Tomato nucleus, plastid, unclear 76.8 77.0
KRG90549 Soybean endoplasmic reticulum, plasma membrane, vacuole 75.75 75.75
HORVU7Hr1G115540.9 Barley golgi, plasma membrane, plastid 75.88 71.22
HORVU0Hr1G032070.1 Barley cytosol, peroxisome, vacuole 32.24 71.1
KRH33828 Soybean endoplasmic reticulum 66.19 70.04
HORVU1Hr1G061140.3 Barley golgi, mitochondrion, plasma membrane 74.57 68.97
HORVU4Hr1G033720.1 Barley golgi, plasma membrane, vacuole 24.38 63.27
HORVU5Hr1G076290.2 Barley endoplasmic reticulum, plasma membrane, vacuole 43.25 60.0
HORVU7Hr1G114250.2 Barley endoplasmic reticulum 34.21 59.73
HORVU7Hr1G031470.3 Barley golgi, plasma membrane 6.55 59.52
HORVU0Hr1G028950.5 Barley plasma membrane 34.86 57.33
HORVU0Hr1G032540.1 Barley endoplasmic reticulum, plasma membrane 34.73 56.75
HORVU6Hr1G083160.1 Barley plasma membrane 37.35 35.67
Protein Annotations
KEGG:00190+3.6.1.1MapMan:24.1.4.1EMBL:AK375042UniProt:F2EFW5GO:GO:0003674GO:GO:0003824
GO:GO:0004427GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009678
GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0055085GO:GO:1902600
EnsemblPlantsGene:HORVU1Hr1G023100EnsemblPlants:HORVU1Hr1G023100.1HAMAP:MF_01129PFAM:PF03030PIRSF:PIRSF001265InterPro:PPase-energised_H-pump
PANTHER:PTHR31998PANTHER:PTHR31998:SF25TIGRFAMs:TIGR01104TMHMM:TMhelixUniParc:UPI0002008966SEG:seg
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EFW5]
Coordinates
chrchr1H:-:100906977..100911501
Molecular Weight (calculated)
79172.4 Da
IEP (calculated)
6.428
GRAVY (calculated)
0.595
Length
763 amino acids
Sequence
(BLAST)
001: MAVIGTAGAE ALIPLAAVIG IAFAVFQWYV VAKVPVPAHD GGDLSAAQKG RSGHDESAED GVDYRQVEAR CAEIQHAISI GATSFLFTEY KYLAVFMAGF
101: AVVIFMFLGS AQRFSTRPEP CTYDPARLCR PALANAAFSM IAFLLGALTS VMSGYLGMRV ATFANARTAL EARRGVGRAF VVAFRSGAAM GFLLASSALF
201: VLYVAINLFG VYYGDDWGGL YESITGYGLG GSSMALFGRV GGGIYTKAAD VGADLVGKVE RNIPEDDPRN PAVIADNVGD NVGDIAGMGS DLFGSYAESS
301: CAALFVASIS SFGTEHNFAA MMYPLLISAM GIVVCLATTV VATDLAEVKT VEQIGPALKR QILISTVLMT VGIAIVSFLV LPHSFTLFDF GRRKLVKNWY
401: LFICVSAGLW AGLVIGYVTE YFTSNAYRPV QAVANSCRTG AATNVIFGLA VGYKSVIVPI FAIATAIYAS FRLAAMYGIA LAALGMLSTI ATGLSIDAYG
501: PISDNAGGIA EMSGMPHVVR ERTDALDAAG NTTAAIGKGF AIGSAALVSL ALFGAYVSRA GIAAVDVLSP QVFAGLLVGA MLPYWFSAMT MRSVGSAALA
601: MVEEVRRQFD SIPGLMEGTA KPDYATCVKI STDASLKKML APGALVMLSP LVAGTLFGTE TLAGLLAGAL VSGVQVAISA SNSGGAWDNA KKYIEAGASA
701: EARALGPKGS DAHKAAVIGD TIGDPLKDTS GPSLNILIKL MAVEALVFAP FFAAHGGLIF KHL
Best Arabidopsis Sequence Match ( AT1G15690.2 )
(BLAST)
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATHGGILFK YF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.