Factsheet for Os05t0156900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

vacuole: 18557835
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037576_P001	Maize	plastid	85.06	85.62
EES19071	Sorghum	plasma membrane	85.58	85.36
TraesCS1B01G124600.1	Wheat	golgi	84.29	84.95
TraesCS1D01G107600.1	Wheat	golgi	84.03	84.58
HORVU1Hr1G023100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	83.77	84.53
TraesCS1A01G107200.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	84.03	83.48
Os02t0184200-01	Rice	plasma membrane	33.25	81.53
VIT_14s0060g01280.t01	Wine grape	golgi, plasma membrane, vacuole	74.68	75.76
PGSC0003DMT400007173	Potato	plasma membrane	74.42	75.3
GSMUA_Achr8P06450_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	74.81	75.29
Os01t0337500-00	Rice	plasma membrane	75.45	75.16
Solyc01g100390.2.1	Tomato	nucleus, plastid, unclear	73.77	74.64
KRG90549	Soybean	endoplasmic reticulum, plasma membrane, vacuole	73.12	73.79
Os02t0802500-01	Rice	plasma membrane	72.99	73.75
Os06t0178900-01	Rice	plasma membrane	72.73	73.01
Os06t0644200-01	Rice	plasma membrane	73.25	72.12
KRH33828	Soybean	endoplasmic reticulum	64.29	68.65
Os02t0537900-01	Rice	plasma membrane	37.14	35.79

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:24.1.4.1	EntrezGene:4337864	ProteinID:AAS55761.1	EMBL:AK107275	ProteinID:BAF16615.1
ProteinID:BAS92369.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0055085	GO:GO:1902600	HAMAP:MF_01129	EnsemblPlantsGene:Os05g0156900	EnsemblPlants:Os05t0156900-01	PFAM:PF03030
PIRSF:PIRSF001265	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF25	UniProt:Q75M03	TIGRFAMs:TIGR01104
TMHMM:TMhelix	UniParc:UPI0000253D7B	RefSeq:XP_015637888.1	SEG:seg	:	:

Description

Chalk5Vacuolar H+-translocating pyrophosphatase, Regulation of grain chalkiness (Os05t0156900-01)

Coordinates

chr5:-:3335380..3339817

Molecular Weight (calculated)

79014.3 Da

IEP (calculated)

4.806

GRAVY (calculated)

0.540

Length

770 amino acids

Sequence
(BLAST)

001: MALIGTVAAE VLIPLAAVIG ILFAVLQWYM VSRVAVPPHD GVGGAGKVER ESDGGDGDGD GVDDEEDGVD YRGVEARCAE IQHAISVGAT SFLMTEYKYL
101: GAFMAAFAAV IFVSLGSVGR FSTSTEPCPY DAARRCRPAL ANAAFTAAAF LLGATTSVVS GYLGMRVATF ANARTALEAR RGIGRAFAVA FRSGAAMGFL
201: LASSALLVLF AAVNAFGLYY GDDWGGLYEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKVERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAESSCAA LFVASISSFG ADHDFAAMMY PLLVSAAGIV ACAATTLVAT DAGELGAADE VAPALKRQIL ISTVLMTAAV AAVTFLSLPR SFTLFDFGER
401: KLVKNWHLFI CVSAGLWAGL VIGYVTEYFT SNAYGPVQTV AQSCRTGAAT NVIFGLAVGY KSVIVPIFAI AGAIYASFRL AAMYGIALAA LGMLSTIATG
501: LTIDAYGPIS DNAGGIAEMA GMPRRVRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAYVSRAGIR TVNVVSPRVF VGLLAGAMLP YWFSAMTMRS
601: VGSAALRMVE EVRRQFDEIP GLAEGLAAPD YATCVRISTD ASLREMVAPG ALVMASPLVA GTLFGVEALA GLLAGALVSG VQVAISASNS GGAWDNAKKY
701: IEAGATEEAR SLGPKGSEAH KAAVIGDTIG DPLKDTSGPS LNILVKLMAV EALVFAPFFA AHGGIVFNHL

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.