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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 5
  • extracellular 3
  • endoplasmic reticulum 4
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
YLoc:plasma membrane
vacuole: 18557835
nucleus: 19621931
golgi: 25047511
plasma membrane: 27800704
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007132_P001 Maize extracellular, golgi, vacuole 34.71 94.78
Zm00001d021760_P001 Maize endoplasmic reticulum, extracellular, vacuole 76.75 77.49
Zm00001d023416_P001 Maize golgi, peroxisome, plasma membrane 76.11 74.45
EES06395 Sorghum plasma membrane 98.73 40.47
Zm00001d015569_P001 Maize plasma membrane 98.41 40.34
PGSC0003DMT400078835 Potato extracellular 96.82 39.74
Solyc07g007600.2.1 Tomato nucleus, plastid 96.82 39.74
Os06t0644200-01 Rice plasma membrane 98.09 39.39
KRH20199 Soybean nucleus 95.54 39.22
PGSC0003DMT400020475 Potato endoplasmic reticulum, plasma membrane, vacuole 95.86 39.14
Solyc12g009840.1.1 Tomato nucleus, unclear 95.54 39.01
Os06t0178900-01 Rice plasma membrane 94.9 38.85
Zm00001d041315_P001 Maize plastid 87.9 38.49
Os02t0802500-01 Rice plasma membrane 92.99 38.32
KRH03609 Soybean plasma membrane 91.72 38.2
Zm00001d053727_P003 Maize plasma membrane 98.41 35.97
Os01t0337500-00 Rice plasma membrane 84.08 34.15
Os05t0156900-01 Rice plasma membrane 81.53 33.25
Os02t0537900-01 Rice plasma membrane 48.41 19.02
Protein Annotations
KEGG:00190+3.6.1.1MapMan:24.1.4.1UniProt:A0A0P0VFX2ProteinID:BAS77331.1GO:GO:0003674GO:GO:0003824
GO:GO:0004427GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009678
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0055085GO:GO:1902600EnsemblPlantsGene:Os02g0184200
EnsemblPlants:Os02t0184200-01PFAM:PF03030InterPro:PPase-energised_H-pumpPANTHER:PTHR31998PANTHER:PTHR31998:SF10TMHMM:TMhelix
UniParc:UPI000393C4DCSEG:seg::::
Description
Similar to Vacuolar proton pyrophosphatase. (Os02t0184200-01)
Coordinates
chr2:-:4693892..4695523
Molecular Weight (calculated)
32277.8 Da
IEP (calculated)
7.662
GRAVY (calculated)
0.650
Length
314 amino acids
Sequence
(BLAST)
001: ALGYKSVIIP IFAIAFSIFL SFSLAAMYGV AVAALGMLST IATGLAIDAY GPISDNAGGI AEMAGMSHRI RERTDALDAA GNTTAAIGKG FAIGSAALVS
101: LALFGAFVSR AAISTVDVLT PKVFIGLIVG AMLPYWFSAM TMKSVGSAAL KMVEEVRRQF NTIPGLMEGT TKPDYATCVK ISTDASIKEM IPPGALVMLT
201: PLIVGILFGV ETLSGVLAGA LVSGVQIAIS ASNTGGAWDN AKKYIEAGAS EHARTLGPKG SDPHKAAVIG DTIGDPLKDT SGPSLNILIK LMAVESLVFA
301: PFFATHGGIL FKLF
Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.