Factsheet for PGSC0003DMT400020475

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

cytosol 1
vacuole 7
extracellular 4
endoplasmic reticulum 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g009840.1.1	Tomato	nucleus, unclear	98.7	98.7
Os02t0184200-01	Rice	plasma membrane	39.14	95.86
PGSC0003DMT400078835	Potato	extracellular	94.02	94.51
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	35.24	94.1
KRH20199	Soybean	nucleus	91.42	91.9
KRH03609	Soybean	plasma membrane	89.73	91.51
Zm00001d007132_P001	Maize	extracellular, golgi, vacuole	13.65	91.3
PGSC0003DMT400036847	Potato	plasma membrane	89.99	90.22
EES06395	Sorghum	plasma membrane	87.52	87.86
Zm00001d015569_P001	Maize	plasma membrane	87.0	87.34
Zm00001d046591_P001	Maize	plasma membrane	86.61	86.38
TraesCS7A01G517700.2	Wheat	golgi	85.96	85.29
TraesCS7B01G433800.1	Wheat	plastid, unclear	85.96	85.18
Os06t0644200-01	Rice	plasma membrane	86.61	85.17
TraesCS7D01G507600.1	Wheat	golgi	85.83	85.16
OQU76770	Sorghum	plasma membrane	86.61	83.04
PGSC0003DMT400007173	Potato	plasma membrane	81.92	82.79
HORVU7Hr1G115540.9	Barley	golgi, plasma membrane, plastid	86.35	81.67
Zm00001d023416_P001	Maize	golgi, peroxisome, plasma membrane	32.64	78.19
Zm00001d053727_P003	Maize	plasma membrane	86.74	77.65
Zm00001d041315_P001	Maize	plastid	70.74	75.87
Zm00001d021760_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.43	75.24
PGSC0003DMT400005448	Potato	plasma membrane	13.65	69.54
Zm00001d012070_P001	Maize	plastid	31.34	65.49
PGSC0003DMT400045710	Potato	cytosol	10.14	62.9
Zm00001d003860_P002	Maize	mitochondrion	30.95	59.06
Zm00001d032330_P001	Maize	plastid	32.77	52.72
PGSC0003DMT400064558	Potato	plasma membrane	33.94	33.98

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:102600043	MapMan:24.1.4.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	UniProt:M1ADJ8
HAMAP:MF_01129	PFAM:PF03030	EnsemblPlantsGene:PGSC0003DMG400007913	PGSC:PGSC0003DMG400007913	EnsemblPlants:PGSC0003DMT400020475	PIRSF:PIRSF001265
InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10	TIGRFAMs:TIGR01104	TMHMM:TMhelix	UniParc:UPI0002968F45
RefSeq:XP_006350116.1	SEG:seg	:	:	:	:

Description

Inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400007913]

Coordinates

chr12:-:2467759..2473729

Molecular Weight (calculated)

80220.8 Da

IEP (calculated)

4.835

GRAVY (calculated)

0.618

Length

769 amino acids

Sequence
(BLAST)

001: MGTTILSDLG TEILIPVCAL IGIGFALVQW VIVSKVTVST DGKSSSSGAG TDGKNGYAES LIEEEEGIND HSVVHKCAEI QNAIAEGATS FLFTEYQYVG
101: VFMVAFAILI FLFLGSVEGF STKSQACTYD SSKMCKPALA TAVFSTISFL LGAVTSVISG FLGMKIATYA NARTTLEARK GVGKAFIVAF RSGAVMGFLL
201: AANGLLVLYI AINVFKLYYG DDWEGLFEAI TGYGLGGSSM ALFGRVGGGI YTKAADVGAD LVGKVERNIP EDDPRNPAVI ADNVGDNVGD IAGMGSDLFG
301: SYAESSCAAL VVASISSFGV NHEFTAMLYP LLISSVGILV CLLTTLFATD FFEVKAVKEI EPALKKQLVI STVLMTIGIA LVSWIALPST FTIFNFGIQK
401: EVQSWQLFLC VGVGLWAGLI IGFVTEYYTS NAYSPVQDVA DSCRTGAATN IIFGLALGYK SVIIPIFAIA ISIFVSFSFA AMYGIAVAAL GMLSTIATGL
501: AIDAYGPISD NAGGIAEMAG MSHRIRERTD ALDAAGNTTA AIGKGFAIGS AALVSLALFG AFVSRAGIST VDVLTPKVFI GLLVGAMLPY WFSAMTMKSV
601: GSAALKMVEE VRRQFNTIPG LMEGTAKPDY ANCVKISTDA SIKEMIPPGA LVMLTPLIVG ILFGVETLSG VLAGSLVSGV QIAISASNTG GAWDNAKKYI
701: EAGASEHAKT LGPKGSDPHK AAVIGDTVGD PLKDTSGPSL NILIKLMAVE SLVFAPFFAT HGGLLFKMF

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.