Factsheet for PGSC0003DMT400005448

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 3
plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043448_P001	Maize	endoplasmic reticulum, extracellular	12.58	82.61
PGSC0003DMT400045710	Potato	cytosol	67.55	82.26
HORVU0Hr1G032070.1	Barley	cytosol, peroxisome, vacuole	56.95	24.86
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	41.06	21.53
HORVU7Hr1G114250.2	Barley	endoplasmic reticulum	57.62	19.91
HORVU0Hr1G032540.1	Barley	endoplasmic reticulum, plasma membrane	55.63	17.99
HORVU0Hr1G028950.5	Barley	plasma membrane	54.97	17.89
PGSC0003DMT400007173	Potato	plasma membrane	72.85	14.45
PGSC0003DMT400078835	Potato	extracellular	70.86	13.99
PGSC0003DMT400036847	Potato	plasma membrane	69.54	13.69
PGSC0003DMT400020475	Potato	endoplasmic reticulum, plasma membrane, vacuole	69.54	13.65
HORVU5Hr1G076290.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	26.49	7.27
PGSC0003DMT400064558	Potato	plasma membrane	35.76	7.03

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:107063290	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	UniProt:M0ZPW8
PFAM:PF03030	EnsemblPlantsGene:PGSC0003DMG400002126	PGSC:PGSC0003DMG400002126	EnsemblPlants:PGSC0003DMT400005448	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998
PANTHER:PTHR31998:SF24	TMHMM:TMhelix	UniParc:UPI0002958FD4	RefSeq:XP_015170446.1	:	:

Description

Vacuolar H+-pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400002126]

Coordinates

chr5:+:26137172..26138036

Molecular Weight (calculated)

15842.0 Da

IEP (calculated)

4.111

GRAVY (calculated)

0.430

Length

151 amino acids

Sequence
(BLAST)

001: MSTIAKSYSP VQEVADSCKT GAATNVIFGL ALGYKSVIIP IFSIAASIYV SFSLADMYGI ADAALGMLST IATGLAIDVY GPISDNVGGI AEMAGMSHNI
101: REKIDALDAA GNTTSAIGKI LKIEVTSQDA SLEDAKDYYY FAMEVMQNFI S

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.