Factsheet for PGSC0003DMT400073438

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
vacuole 7
extracellular 4
endoplasmic reticulum 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07940.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	95.49	69.62
VIT_09s0002g07920.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	89.24	68.53
KRH61103	Soybean	endoplasmic reticulum, plasma membrane	21.18	53.51
PGSC0003DMT400045710	Potato	cytosol	20.83	48.39
VIT_09s0002g08010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	43.4	48.26
Zm00001d041187_P002	Maize	cytosol, endoplasmic reticulum, golgi	23.96	43.12
PGSC0003DMT400005448	Potato	plasma membrane	21.53	41.06
Solyc06g068240.2.1	Tomato	plastid	97.57	36.64
PGSC0003DMT400036847	Potato	plasma membrane	97.57	36.64
KRH47417	Soybean	nucleus	96.88	36.33
KRH44486	Soybean	endoplasmic reticulum	96.53	36.2
VIT_09s0002g07880.t01	Wine grape	extracellular	96.18	36.11
PGSC0003DMT400078835	Potato	extracellular	94.44	35.56
PGSC0003DMT400020475	Potato	endoplasmic reticulum, plasma membrane, vacuole	94.1	35.24
VIT_11s0118g00350.t01	Wine grape	plasma membrane	93.06	35.08
CDX87313	Canola	endoplasmic reticulum, plasma membrane, vacuole	93.4	34.98
Bra035179.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	93.4	34.98
AT1G15690.1	Thale cress	plasma membrane	93.4	34.94
CDX83972	Canola	plasma membrane	92.71	34.72
CDY39975	Canola	plasma membrane	92.71	34.72
CDX96835	Canola	plasma membrane	92.71	34.72
CDY36581	Canola	plasma membrane	92.71	34.63
CDY33390	Canola	plasma membrane	92.36	34.5
Bra026115.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	91.67	34.24
Bra016653.1-P	Field mustard	plasma membrane	91.32	34.2
PGSC0003DMT400007173	Potato	plasma membrane	90.28	34.17
CDY53310	Canola	plasma membrane	92.36	33.17
CDX81728	Canola	plasma membrane	92.71	22.74
PGSC0003DMT400064558	Potato	plasma membrane	42.36	15.89

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	UniProt:M1CS04	PFAM:PF03030
EnsemblPlantsGene:PGSC0003DMG401028529	PGSC:PGSC0003DMG401028529	EnsemblPlants:PGSC0003DMT400073438	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294A752	:	:	:

Description

Inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG401028529]

Coordinates

chr6:+:49878727..49880692

Molecular Weight (calculated)

29489.2 Da

IEP (calculated)

6.959

GRAVY (calculated)

0.564

Length

288 amino acids

Sequence
(BLAST)

001: MYGIAVAALG MLSTIATGLA IDAYGPISDN AGGIAEMAGM SHRIRERTDA LDAAGNTTAA IGKGYAIGSA ALVSLALFGA FVSRASISTV DVLTPKVFIG
101: LIVGAMLPYW FSAMTMKSVG SAALKMVEEV RGQFNTIPGL MEGLAKPDYT TCVKISTDAS IKEIIPPGAL VMLTPLIVGI FFGVETLSGV LAGALVSGVQ
201: IAISASNTGG AWDNAKKYIE AGASEHARTL GPKGSEPHKA AVIGNTIGDP LKDTSGPSLN ILIKLMAVES LVFAPIFATH GGILFKIF

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.