Factsheet for VIT_09s0002g07920.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
vacuole 7
extracellular 4
endoplasmic reticulum 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07940.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	99.2	94.18
VIT_09s0002g08010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	62.4	90.35
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	68.53	89.24
KRH61103	Soybean	endoplasmic reticulum, plasma membrane	24.53	80.7
VIT_09s0002g07880.t01	Wine grape	extracellular	99.47	48.63
VIT_11s0118g00350.t01	Wine grape	plasma membrane	96.0	47.12
KRH47417	Soybean	nucleus	95.73	46.74
Solyc06g068240.2.1	Tomato	plastid	95.47	46.68
KRH44486	Soybean	endoplasmic reticulum	95.47	46.61
PGSC0003DMT400036847	Potato	plasma membrane	95.2	46.55
Solyc03g117480.2.1	Tomato	nucleus, unclear	94.93	46.41
AT1G15690.1	Thale cress	plasma membrane	94.13	45.84
Zm00001d041187_P002	Maize	cytosol, endoplasmic reticulum, golgi	19.47	45.62
VIT_14s0060g01280.t01	Wine grape	golgi, plasma membrane, vacuole	90.13	44.53
Bra018135.1-P	Field mustard	plastid	88.53	43.34
CDY61273	Canola	plastid	58.4	36.14
VIT_09s0054g00700.t01	Wine grape	plasma membrane	42.67	20.0
VIT_01s0026g01410.t01	Wine grape	golgi, plasma membrane, vacuole	1.33	3.05

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100253207	wikigene:100253207	MapMan:35.1	ProteinID:CCB59661	ProteinID:CCB59661.1
UniProt:F6HXJ1	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	EntrezGene:LOC100253207	wikigene:LOC100253207
PFAM:PF03030	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10	TMHMM:TMhelix	UniParc:UPI000210AA57
ArrayExpress:VIT_09s0002g07920	EnsemblPlantsGene:VIT_09s0002g07920	EnsemblPlants:VIT_09s0002g07920.t01	RefSeq:XP_002272320	RefSeq:XP_002272320.2	:

Description

No Description!

Coordinates

chr9:+:8441506..8443766

Molecular Weight (calculated)

38992.9 Da

IEP (calculated)

7.562

GRAVY (calculated)

0.700

Length

375 amino acids

Sequence
(BLAST)

001: MTVGVAIVSW IALPSSFTIF NFGSQKVVKN WQLFLCVGVG LWAGLIIGFV TEYYTSNAYS PVQDVADSYR TGTATNVIFG LALGYKSVII PIFAIAVSIF
101: VSFSFAAMYG IAVAALGMLS TIATGLAIDA YGPISDNAGG IAEMAGMSHR IRERTDALDA AGNTTAAIGK GFAIGSAALV SLALFGAFVS RASISTVDVL
201: TPKVFIGLLV GAMLPYWFSA MTMKSVGSAA LKMVEEVRRQ FNTIPGLMEG LAKPDYATCV KISTDASIKE MIPPGALVML TPLIVGTFFG VETLSGVLAG
301: SLVSGVQAGA SEHARTLGPK GSDPHKAAVI GDTIGDPLKD TSGPSLNILI KLMAVESLVF APFFATHGGL LFKIF

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.