Factsheet for VIT_09s0002g07880.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 1
vacuole 6
extracellular 3
endoplasmic reticulum 4
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07920.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	48.63	99.47
VIT_09s0002g07940.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	50.85	98.73
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	36.11	96.18
PGSC0003DMT400036847	Potato	plasma membrane	93.09	93.09
KRH44486	Soybean	endoplasmic reticulum	92.96	92.84
KRH47417	Soybean	nucleus	92.96	92.84
Solyc03g117480.2.1	Tomato	nucleus, unclear	92.31	92.31
Solyc06g068240.2.1	Tomato	plastid	91.79	91.79
VIT_11s0118g00350.t01	Wine grape	plasma membrane	91.26	91.62
VIT_09s0002g08010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	30.25	89.58
AT1G15690.1	Thale cress	plasma membrane	89.44	89.09
KRH61103	Soybean	endoplasmic reticulum, plasma membrane	13.04	87.72
VIT_14s0060g01280.t01	Wine grape	golgi, plasma membrane, vacuole	83.18	84.06
Bra018135.1-P	Field mustard	plastid	68.32	68.41
CDY61273	Canola	plastid	53.32	67.49
VIT_01s0026g01410.t01	Wine grape	golgi, plasma membrane, vacuole	13.3	62.2
Zm00001d041187_P002	Maize	cytosol, endoplasmic reticulum, golgi	10.82	51.88
VIT_09s0054g00700.t01	Wine grape	plasma membrane	37.03	35.5

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100256710	wikigene:100256710	EntrezGene:100266984	wikigene:100266984	MapMan:24.1.4.1
ProteinID:CBI36393	ProteinID:CBI36393.3	UniProt:D7TZ79	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600
EntrezGene:LOC100256710	wikigene:LOC100256710	EntrezGene:LOC100266984	wikigene:LOC100266984	HAMAP:MF_01129	PFAM:PF03030
PIRSF:PIRSF001265	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10	TIGR:TC68748	TIGRFAMs:TIGR01104
TMHMM:TMhelix	UniParc:UPI00015CC791	ArrayExpress:VIT_09s0002g07880	EnsemblPlantsGene:VIT_09s0002g07880	EnsemblPlants:VIT_09s0002g07880.t01	unigene:Vvi.1368
RefSeq:XP_002273207	RefSeq:XP_002273207.1	RefSeq:XP_003632767	RefSeq:XP_003632767.1	RefSeq:XP_003632833	RefSeq:XP_003632833.1

Description

No Description!

Coordinates

chr9:+:8343180..8349158

Molecular Weight (calculated)

80447.1 Da

IEP (calculated)

5.118

GRAVY (calculated)

0.612

Length

767 amino acids

Sequence
(BLAST)

001: MGSTILSDLA TEIVVPVCAV IGIVFSLIQW FLVSRIKVSP DRHSSSSNNG KGAGYGDYLI EEEEGLNDHN VVVKCAEIQS AISEGATSFL FTEYQYVGVF
101: MVAFAILIFL FLGSVNGFST KSQVCTYNPQ EMCKPALATA IFSTVSFMLG AVTSVISGFL GMKIATYANA RTTLEARKGV GKAFIVAFRS GAVMGFLLAA
201: NGLLVLYIAI NLFKLYYGDD WEGLFEAITG YGLGGSSMAL FGRVGGGIYT KAADVGADLV GKVERNIPED DPRNPAVIAD NVGDNVGDIA GMGSDLFGSY
301: AESSCAALVV ASISSFGINH DFTAMCYPLL VSSMGILVCL ITTLFATDFF EIKAVKEIEP ALKKQLIIST VLMTVGVAIV SWIALPSSFT IFNFGSQKVV
401: KNWQLFLCVG VGLWAGLIIG FVTEYYTSNA YSPVQDVADS CRTGAATNVI FGLALGYKSV IIPIFAIAVS IFVSFSFAAM YGIAVAALGM LSTIATGLAI
501: DAYGPISDNA GGIAEMAGMS HRIRERTDAL DAAGNTTAAI GKGFAIGSAA LVSLALFGAF VSRASISTVD VLTPKVFIGL LVGAMLPYWF SAMTMKSVGS
601: AALKMVEEVR RQFNTIPGLM EGLAKPDYAT CVKISTDASI KEMIPPGALV MLTPLIVGTF FGVETLSGVL AGSLVSGVQI AISASNTGGA WDNAKKYIEA
701: GASEHARTLG PKGSDPHKAA VIGDTIGDPL KDTSGPSLNI LIKLMAVESL VFAPFFATHG GLLFKIF

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.