Factsheet for VIT_01s0026g01410.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
vacuole 7
extracellular 4
endoplasmic reticulum 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71586	Soybean	extracellular	46.95	55.0
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	53.66	18.53
VIT_09s0002g07880.t01	Wine grape	extracellular	62.2	13.3
VIT_11s0118g00350.t01	Wine grape	plasma membrane	59.76	12.83
VIT_14s0060g01280.t01	Wine grape	golgi, plasma membrane, vacuole	57.93	12.52
VIT_09s0054g00700.t01	Wine grape	plasma membrane	31.1	6.38
VIT_09s0002g08010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	3.05	1.93
VIT_09s0002g07940.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	3.66	1.52
VIT_09s0002g07920.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	3.05	1.33
GSMUA_AchrUn_...	Banana	plasma membrane	0.0	0.0

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	ProteinID:CCB56594	ProteinID:CCB56594.1	UniProt:F6HPG6	EMBL:FN596002
GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0055085	GO:GO:1902600	PFAM:PF03030	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10
TMHMM:TMhelix	UniParc:UPI0002108294	ArrayExpress:VIT_01s0026g01410	EnsemblPlantsGene:VIT_01s0026g01410	EnsemblPlants:VIT_01s0026g01410.t01	SEG:seg

Description

No Description!

Coordinates

chr1:+:10386150..10386913

Molecular Weight (calculated)

17708.2 Da

IEP (calculated)

6.777

GRAVY (calculated)

0.844

Length

164 amino acids

Sequence
(BLAST)

001: MFEGVGKASI VAFRSGVVMG FLLAANDLLV LYIAINLFML YYSDDWEGLF EAVTGYGLGR SSMALFGRVG GGIYAKAANV GVNLVGKVER NIPKDDLRNL
101: VVIANNVGDK VGDITGMGSY FFGSMMSHPI LLLLLLPSHH LVSIMISLLC VIPCLSVPWV FLFV

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.