Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70253 | Canola | golgi, plasma membrane | 29.38 | 94.0 |
| CDY70021 | Canola | golgi, plasma membrane | 28.5 | 93.44 |
| KRH46977 | Soybean | endoplasmic reticulum | 90.62 | 90.51 |
| KRH44688 | Soybean | plasma membrane | 90.38 | 90.26 |
| PGSC0003DMT400064558 | Potato | plasma membrane | 85.62 | 89.19 |
| Solyc04g071880.2.1 | Tomato | nucleus, plastid | 89.12 | 89.12 |
| Bra008386.1-P | Field mustard | plasma membrane | 88.88 | 88.54 |
| AT1G78920.2 | Thale cress | plasma membrane | 88.75 | 88.53 |
| CDX88491 | Canola | plasma membrane | 88.75 | 88.53 |
| AT1G16780.1 | Thale cress | golgi, mitochondrion, plasma membrane | 88.75 | 88.53 |
| CDX87422 | Canola | plasma membrane | 88.62 | 88.4 |
| Bra035076.1-P | Field mustard | plasma membrane | 88.62 | 88.4 |
| Os02t0537900-01 | Rice | plasma membrane | 87.62 | 87.73 |
| TraesCS6B01G376400.1 | Wheat | golgi | 87.38 | 87.48 |
| TraesCSU01G080600.1 | Wheat | plasma membrane | 87.25 | 87.36 |
| TraesCS6D01G326300.1 | Wheat | plasma membrane | 87.25 | 87.36 |
| Zm00001d030996_P011 | Maize | plasma membrane | 87.12 | 87.23 |
| EES17335 | Sorghum | plasma membrane | 87.12 | 87.23 |
| HORVU6Hr1G083160.1 | Barley | plasma membrane | 87.12 | 87.23 |
| Zm00001d041420_P003 | Maize | plasma membrane | 86.88 | 86.12 |
| GSMUA_Achr5P13160_001 | Banana | plasma membrane | 88.0 | 85.02 |
| CDY69568 | Canola | plasma membrane | 36.75 | 84.97 |
| CDY69601 | Canola | plasma membrane | 36.38 | 84.1 |
| GSMUA_Achr1P01170_001 | Banana | cytosol, plasma membrane, vacuole | 26.75 | 71.33 |
| VIT_09s0002g07940.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 21.88 | 44.3 |
| VIT_09s0002g07920.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 20.0 | 42.67 |
| VIT_11s0118g00350.t01 | Wine grape | plasma membrane | 36.5 | 38.22 |
| VIT_14s0060g01280.t01 | Wine grape | golgi, plasma membrane, vacuole | 35.88 | 37.81 |
| VIT_09s0002g08010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 12.12 | 37.45 |
| VIT_09s0002g07880.t01 | Wine grape | extracellular | 35.5 | 37.03 |
| VIT_01s0026g01410.t01 | Wine grape | golgi, plasma membrane, vacuole | 6.38 | 31.1 |
Protein Annotations
| KEGG:00190+3.6.1.1 | EntrezGene:100247980 | wikigene:100247980 | MapMan:24.1.4.2 | ProteinID:CBI18453 | ProteinID:CBI18453.3 |
| UniProt:D7SS21 | EMBL:FN594972 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009678 | GO:GO:0015992 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0055085 | GO:GO:1902600 | EntrezGene:LOC100247980 | wikigene:LOC100247980 |
| HAMAP:MF_01129 | PFAM:PF03030 | PIRSF:PIRSF001265 | InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF11 |
| TIGR:TC66903 | TIGR:TC70418 | TIGRFAMs:TIGR01104 | TMHMM:TMhelix | UniParc:UPI0001984009 | ArrayExpress:VIT_09s0054g00700 |
| EnsemblPlantsGene:VIT_09s0054g00700 | EnsemblPlants:VIT_09s0054g00700.t01 | unigene:Vvi.8822 | RefSeq:XP_002265811 | RefSeq:XP_002265811.2 | RefSeq:XP_010655287.1 |
| RefSeq:XP_010655288.1 | RefSeq:XP_010655289.1 | RefSeq:XP_010655291.1 | RefSeq:XP_019077810.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr9:+:21518781..21535560
Molecular Weight (calculated)
84865.1 Da
IEP (calculated)
5.558
GRAVY (calculated)
0.575
Length
800 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDVESGAL GPYQDKPRIF PNMRSKSYTP LIFRIFMGIN VRVLFVLLLL GLGAVFYVGA RTSPILVFVF SVCIISFLLS VYLTKWVLAK DEGPPEMAQI
101: SDAIRDGAEG FFRTQYGTIS KMAMLLALVI LSIYLFRSTT PQQESSGIGR STTAYITVAA FLLGALCSGI AGYVGMWVSV RANVRVSSAA RRSAREALQI
201: AVRAGGFSAL VVVGMAVIGV AILYATFYVW LGVDSTGSMK VTDLPLLLVG YGFGASFVAL FAQLGGGIYT KAADVGADLV GKVEQGIPED DPRNPAVIAD
301: LVGDNVGDCA ARGADLFESI AAEIISAMIL GGTMAQRCKI EDPSGFILFP LVIHSFDLVI SSVGIFSIRG TRDSGVKSPV EDPMAILQKG YSITIILAVL
401: TFGLSTRWLL YTEQAPSAWM NFALCGLVGI MTAYVFVWIT KYYTDYKHEP VRTLALSSST GHGTNIIAGV SLGLESTALP VIVISISIVS AFWLGQTSGL
501: VDETGNPTGG LFGTAVATMG MLSTAAYVLT MDMFGPIADN AGGIVEMSQQ PESVREITDL LDAVGNTTKA TTKGFAIGSA ALASFLLFSA YMDEVSAFAH
601: EPFKQVDIAI PEVFVGGLLG SMLIFLFSAW ACSAVGRTAQ EVVNEVRRQF IERPGIMDYK EKPDYGRCVA IVASASLREM IKPGALAIVS PIVVGFLFRI
701: LGYYTGHPLL GAKVVASMLM FATVAGILMA LFLNTAGGAW DNAKKYIETG ALGGKGSDAH KAAVTGDTVG DPFKDTAGPS LHVLIKMLAT ITLVMAPVFL
101: SDAIRDGAEG FFRTQYGTIS KMAMLLALVI LSIYLFRSTT PQQESSGIGR STTAYITVAA FLLGALCSGI AGYVGMWVSV RANVRVSSAA RRSAREALQI
201: AVRAGGFSAL VVVGMAVIGV AILYATFYVW LGVDSTGSMK VTDLPLLLVG YGFGASFVAL FAQLGGGIYT KAADVGADLV GKVEQGIPED DPRNPAVIAD
301: LVGDNVGDCA ARGADLFESI AAEIISAMIL GGTMAQRCKI EDPSGFILFP LVIHSFDLVI SSVGIFSIRG TRDSGVKSPV EDPMAILQKG YSITIILAVL
401: TFGLSTRWLL YTEQAPSAWM NFALCGLVGI MTAYVFVWIT KYYTDYKHEP VRTLALSSST GHGTNIIAGV SLGLESTALP VIVISISIVS AFWLGQTSGL
501: VDETGNPTGG LFGTAVATMG MLSTAAYVLT MDMFGPIADN AGGIVEMSQQ PESVREITDL LDAVGNTTKA TTKGFAIGSA ALASFLLFSA YMDEVSAFAH
601: EPFKQVDIAI PEVFVGGLLG SMLIFLFSAW ACSAVGRTAQ EVVNEVRRQF IERPGIMDYK EKPDYGRCVA IVASASLREM IKPGALAIVS PIVVGFLFRI
701: LGYYTGHPLL GAKVVASMLM FATVAGILMA LFLNTAGGAW DNAKKYIETG ALGGKGSDAH KAAVTGDTVG DPFKDTAGPS LHVLIKMLAT ITLVMAPVFL
001: MMMDEDVEQA TLVSYSDKPR TFPDMRSKTY SPLIIRILRN LNVRALSVLL LLSFGGIFYM GARTSPIIVF VFVVCIISFM LSVYLTKWVL AKDEGPPEMV
101: QISDAIRDGA EGFLRTQYGT ISKMAFLLAF VILCIYLFRN LTPQQEASGL GRTMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLDVDSPGS MKVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEHGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAQKC KIEDPSGFIL FPLVVHSFDL VISSIGILSI KGTRNASVKS PVEDPMVVLQ KGYSLTIILA
401: VLTFGASTRW LLYTEQAPSA WLNFFMCGLV GIITAYVFVW ISRYYTDYKY EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLVISVAI ISAFWLGNTS
501: GLIDEKGNPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DVLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFIGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIMD YKEKPDYGRC VAIVASSALR EMIKPGALAI ISPIAVGFVF
701: RILGYYTGQP LLGAKVVAAM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSD SHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPI
801: FL
101: QISDAIRDGA EGFLRTQYGT ISKMAFLLAF VILCIYLFRN LTPQQEASGL GRTMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLDVDSPGS MKVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEHGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAQKC KIEDPSGFIL FPLVVHSFDL VISSIGILSI KGTRNASVKS PVEDPMVVLQ KGYSLTIILA
401: VLTFGASTRW LLYTEQAPSA WLNFFMCGLV GIITAYVFVW ISRYYTDYKY EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLVISVAI ISAFWLGNTS
501: GLIDEKGNPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DVLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFIGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIMD YKEKPDYGRC VAIVASSALR EMIKPGALAI ISPIAVGFVF
701: RILGYYTGQP LLGAKVVAAM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSD SHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPI
801: FL
Arabidopsis Description
AVPL2Pyrophosphate-energized membrane proton pump 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWR2]
SUBAcon: [mitochondrion,plasma membrane,golgi]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.