CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

cytosol 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70253	Canola	golgi, plasma membrane	99.59	97.2
GSMUA_Achr1P01170_001	Banana	cytosol, plasma membrane, vacuole	61.48	50.0
Bra008386.1-P	Field mustard	plasma membrane	99.59	30.26
AT1G78920.2	Thale cress	plasma membrane	98.77	30.05
CDX87422	Canola	plasma membrane	98.77	30.05
CDX88491	Canola	plasma membrane	98.77	30.05
CDX88482	Canola	endoplasmic reticulum	9.84	30.0
VIT_09s0054g00700.t01	Wine grape	plasma membrane	93.44	28.5
KRH46977	Soybean	endoplasmic reticulum	93.03	28.34
KRH44688	Soybean	plasma membrane	92.21	28.09
TraesCS6D01G326300.1	Wheat	plasma membrane	90.57	27.66
HORVU6Hr1G083160.1	Barley	plasma membrane	90.57	27.66
TraesCS6B01G376400.1	Wheat	golgi	90.57	27.66
TraesCSU01G080600.1	Wheat	plasma membrane	90.57	27.66
Solyc04g071880.2.1	Tomato	nucleus, plastid	90.57	27.62
Zm00001d030996_P011	Maize	plasma membrane	90.16	27.53
EES17335	Sorghum	plasma membrane	90.16	27.53
Os02t0537900-01	Rice	plasma membrane	89.75	27.41
Zm00001d041420_P003	Maize	plasma membrane	90.16	27.26
GSMUA_Achr5P13160_001	Banana	plasma membrane	90.57	26.69
PGSC0003DMT400064558	Potato	plasma membrane	78.28	24.87
CDY39975	Canola	plasma membrane	48.36	15.34
CDX96835	Canola	plasma membrane	47.95	15.21
CDX87313	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.95	15.21
CDX83972	Canola	plasma membrane	47.95	15.21
CDY36581	Canola	plasma membrane	47.95	15.18
CDY33390	Canola	plasma membrane	47.95	15.18
CDY53310	Canola	plasma membrane	47.95	14.59
CDY61273	Canola	plastid	25.0	10.07
CDX81728	Canola	plasma membrane	47.95	9.97
CDY53311	Canola	plastid	11.48	8.05
CDY69601	Canola	plasma membrane	0.0	0.0
CDY69568	Canola	plasma membrane	0.0	0.0

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	GO:A0A078JX01	UniProt:A0A078JX01	EnsemblPlants:CDY70021	ProteinID:CDY70021
ProteinID:CDY70021.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00094298001	PFAM:PF03030	InterPro:PPase-energised_H-pump
PANTHER:PTHR31998	PANTHER:PTHR31998:SF11	TMHMM:TMhelix	UniParc:UPI0004EDC640	SEG:seg	:

Description

BnaCnng66360DBnaCnng66360D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JX01]

Coordinates

chrLK040944:+:50..1244

Molecular Weight (calculated)

25622.6 Da

IEP (calculated)

7.341

GRAVY (calculated)

0.645

Length

244 amino acids

Sequence
(BLAST)

001: ITDLLDAVGN TTKAATKGFA IGSAALASFL LFSAYMDEVS AFASVSFKEV DIAIPEVFVG GLLGSMLIFL FSAWACAAVG RTAQEVVNEV RRQFIERPGI
101: MEYKEKPDYS RCVAIVASAA LREMIKPGAL AIASPIVVGL VFRILGYYTG QPLLGAKVVA SMLMFATVCG ILMALFLNTA GGAWDNAKKY IETGALGGKG
201: SEAHKAAVTG DTVGDPFKDT AGPSIHVLIK MLATITLVMA PVFL

Best Arabidopsis Sequence Match ( AT1G16780.1 )
(BLAST)

001: MMMDEDVEQA TLVSYSDKPR TFPDMRSKTY SPLIIRILRN LNVRALSVLL LLSFGGIFYM GARTSPIIVF VFVVCIISFM LSVYLTKWVL AKDEGPPEMV
101: QISDAIRDGA EGFLRTQYGT ISKMAFLLAF VILCIYLFRN LTPQQEASGL GRTMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLDVDSPGS MKVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEHGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAQKC KIEDPSGFIL FPLVVHSFDL VISSIGILSI KGTRNASVKS PVEDPMVVLQ KGYSLTIILA
401: VLTFGASTRW LLYTEQAPSA WLNFFMCGLV GIITAYVFVW ISRYYTDYKY EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLVISVAI ISAFWLGNTS
501: GLIDEKGNPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DVLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFIGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIMD YKEKPDYGRC VAIVASSALR EMIKPGALAI ISPIAVGFVF
701: RILGYYTGQP LLGAKVVAAM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSD SHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPI
801: FL

Arabidopsis Description

AVPL2Pyrophosphate-energized membrane proton pump 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWR2]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.