Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96835 | Canola | plasma membrane | 64.14 | 97.92 |
| CDY33390 | Canola | plasma membrane | 64.22 | 97.8 |
| CDY36581 | Canola | plasma membrane | 64.22 | 97.8 |
| CDX83972 | Canola | plasma membrane | 63.97 | 97.66 |
| CDY53310 | Canola | plasma membrane | 66.61 | 97.51 |
| AT1G15690.1 | Thale cress | plasma membrane | 62.95 | 95.97 |
| PGSC0003DMT400073438 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 22.74 | 92.71 |
| CDX87313 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 60.56 | 92.46 |
| CDY39975 | Canola | plasma membrane | 60.56 | 92.46 |
| PGSC0003DMT400036847 | Potato | plasma membrane | 59.2 | 90.61 |
| Solyc03g117480.2.1 | Tomato | nucleus, unclear | 59.03 | 90.35 |
| KRH44486 | Soybean | endoplasmic reticulum | 58.43 | 89.32 |
| Solyc06g068240.2.1 | Tomato | plastid | 58.35 | 89.31 |
| KRH47417 | Soybean | nucleus | 58.35 | 89.19 |
| KRH61103 | Soybean | endoplasmic reticulum, plasma membrane | 8.52 | 87.72 |
| CDY61273 | Canola | plastid | 34.92 | 67.66 |
| CDX88482 | Canola | endoplasmic reticulum | 4.34 | 63.75 |
| Zm00001d041187_P002 | Maize | cytosol, endoplasmic reticulum, golgi | 7.16 | 52.5 |
| CDY70021 | Canola | golgi, plasma membrane | 9.97 | 47.95 |
| CDY70253 | Canola | golgi, plasma membrane | 10.14 | 47.6 |
| CDX88491 | Canola | plasma membrane | 23.25 | 34.04 |
| CDX87422 | Canola | plasma membrane | 23.17 | 33.92 |
| CDY69601 | Canola | plasma membrane | 8.43 | 28.61 |
| CDY69568 | Canola | plasma membrane | 8.43 | 28.61 |
| CDY53311 | Canola | plastid | 5.11 | 17.24 |
Protein Annotations
| KEGG:00190+3.6.1.1 | KEGG:00400+1.3.1.12 | KEGG:00401+1.3.1.12 | MapMan:24.1.4.1 | Gene3D:3.40.50.720 | MapMan:4.1.5.2.3 |
| InterPro:6-PGluconate_DH-like_C_sf | GO:A0A078D336 | EnsemblPlants:CDX81728 | ProteinID:CDX81728 | ProteinID:CDX81728.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0004665 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006571 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008977 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009678 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0055114 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00136659001 |
| InterPro:IPR003099 | HAMAP:MF_01129 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF02153 | PFAM:PF03030 | InterPro:PPase-energised_H-pump |
| PFscan:PS51176 | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF10 | MetaCyc:PWY-7303 | InterPro:Prephen_DH | SUPFAM:SSF48179 |
| SUPFAM:SSF51735 | TIGRFAMs:TIGR01104 | TMHMM:TMhelix | UniParc:UPI0004EF4243 | SEG:seg | : |
Description
BnaC08g38730D
Coordinates
chrLK031826:+:530021..535723
Molecular Weight (calculated)
126471.0 Da
IEP (calculated)
6.755
GRAVY (calculated)
0.269
Length
1174 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVASAFLPEL WTEILIPVCA VVGIVFSLFQ WFIVSRVKVS GDQGASSSSG GAKNGYDDYL IEEEEGVNDQ SVVAKCAEIQ TAISEGATSF LFTEYQYVGV
0101: FMVFFAAIIF VFLGSVEGFS TESKPCTYDS TKTCKPALAT AAFSTIAFIL GAVTSVLSGF LGMKIATYAN ARTTLEARKG VGKAFIVAFR SGAVMGFLLA
0201: ASGLLVLYIT INVFKIYYGD DWEGLFEAIT GYGLGGSSMA LFGRVGGGIY TKAADVGADL VGKIERNIPE DDPRNPAVIA DNVGDNVGDI AGMGSDLFGS
0301: YAEASCAALV VASISSFGIN HDFTAMCYPL LISSMGILVC LITTLFATDF FEIKAVKEIE PALKNQLIIS TAIMTVGIAV VSWVGLPSSF TIFNFGTQKV
0401: VQNWQLFLCV CVGLWAGLII GFVTEYYTSN AYSPVQDVAD SCRTGAATNV IFGLALGYKS VIIPIFAIAI SIFVSFSFAA MYGVAVAALG MLSTIATGLA
0501: IDAYGPISDN AGGIAEMAGM SHRIRERTDA LDAAGNTTAA IGKGFAIGSA ALVSLALFGA FVSRAGVHTV DVLTPKVIIG LLVGAMLPYW FSAMTMKSVG
0601: SAALKMVEEV RRQFNTIPGL MEGTAKPDYA TCVKISTDAS IKEMIPPGCL VMLTPLIVGF FFGVETLSGV LAGSLVSGVQ IAISASNTGG AWDNAKKYIE
0701: AGVSEHAKSL GPKGSEPHKA AVIGDTIGDP LKDTSGPSLN ILIKLMAVES LVFAPFFATH GGILFNHTLH QLPSHPGLSL PFIRSSSSSP HIASLLLPQV
0801: VALHTHSSNH HKSLLHHHHR HHTMLLHFSP TKPLFSPPNL RRNPPAIAIS PPRSLRIRAI DAAQIFDYET QLKSEYRKSS ALKIAVLGFG NFGQFLSKTL
0901: VRHGHDLITH SRSDYSSAAS SIGARFFHNP HDLCEQHPDV VLLCTSILST ESVLRSFPFQ RLRRSTLFVD VLSVKEFPKT LFLKYLPKEF DILCTHPMFG
1001: PESGKHSWSG LPFVYDKVRI GGEDSRHERC DKFLKVFESE GCRMVEMSCE EHDKHAAGSQ FVTHTMGRVL EKFGVESSPI NTKGYETLLD LVENTSSDSF
1101: ELYYGLFMYN QNALEQLERL DMAFESIKKE LFGRLHQVYR KQMFGGGEGK KTEQKLLNDG VVRVKEESSS SSSS
0101: FMVFFAAIIF VFLGSVEGFS TESKPCTYDS TKTCKPALAT AAFSTIAFIL GAVTSVLSGF LGMKIATYAN ARTTLEARKG VGKAFIVAFR SGAVMGFLLA
0201: ASGLLVLYIT INVFKIYYGD DWEGLFEAIT GYGLGGSSMA LFGRVGGGIY TKAADVGADL VGKIERNIPE DDPRNPAVIA DNVGDNVGDI AGMGSDLFGS
0301: YAEASCAALV VASISSFGIN HDFTAMCYPL LISSMGILVC LITTLFATDF FEIKAVKEIE PALKNQLIIS TAIMTVGIAV VSWVGLPSSF TIFNFGTQKV
0401: VQNWQLFLCV CVGLWAGLII GFVTEYYTSN AYSPVQDVAD SCRTGAATNV IFGLALGYKS VIIPIFAIAI SIFVSFSFAA MYGVAVAALG MLSTIATGLA
0501: IDAYGPISDN AGGIAEMAGM SHRIRERTDA LDAAGNTTAA IGKGFAIGSA ALVSLALFGA FVSRAGVHTV DVLTPKVIIG LLVGAMLPYW FSAMTMKSVG
0601: SAALKMVEEV RRQFNTIPGL MEGTAKPDYA TCVKISTDAS IKEMIPPGCL VMLTPLIVGF FFGVETLSGV LAGSLVSGVQ IAISASNTGG AWDNAKKYIE
0701: AGVSEHAKSL GPKGSEPHKA AVIGDTIGDP LKDTSGPSLN ILIKLMAVES LVFAPFFATH GGILFNHTLH QLPSHPGLSL PFIRSSSSSP HIASLLLPQV
0801: VALHTHSSNH HKSLLHHHHR HHTMLLHFSP TKPLFSPPNL RRNPPAIAIS PPRSLRIRAI DAAQIFDYET QLKSEYRKSS ALKIAVLGFG NFGQFLSKTL
0901: VRHGHDLITH SRSDYSSAAS SIGARFFHNP HDLCEQHPDV VLLCTSILST ESVLRSFPFQ RLRRSTLFVD VLSVKEFPKT LFLKYLPKEF DILCTHPMFG
1001: PESGKHSWSG LPFVYDKVRI GGEDSRHERC DKFLKVFESE GCRMVEMSCE EHDKHAAGSQ FVTHTMGRVL EKFGVESSPI NTKGYETLLD LVENTSSDSF
1101: ELYYGLFMYN QNALEQLERL DMAFESIKKE LFGRLHQVYR KQMFGGGEGK KTEQKLLNDG VVRVKEESSS SSSS
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.