CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06440_001	Banana	extracellular, golgi, vacuole	41.25	12.6
CDY70021	Canola	golgi, plasma membrane	30.0	9.84
CDY70253	Canola	golgi, plasma membrane	30.0	9.6
CDX87313	Canola	endoplasmic reticulum, plasma membrane, vacuole	66.25	6.89
CDY39975	Canola	plasma membrane	66.25	6.89
CDX83972	Canola	plasma membrane	63.75	6.63
CDX96835	Canola	plasma membrane	63.75	6.63
CDY33390	Canola	plasma membrane	63.75	6.61
CDY36581	Canola	plasma membrane	63.75	6.61
CDY53310	Canola	plasma membrane	63.75	6.36
CDY53311	Canola	plastid	22.5	5.17
CDX81728	Canola	plasma membrane	63.75	4.34
GSMUA_Achr8P06420_001	Banana	extracellular	3.75	4.11
CDX88491	Canola	plasma membrane	35.0	3.49
CDX87422	Canola	plasma membrane	35.0	3.49
Zm00001d043643_P001	Maize	endoplasmic reticulum, extracellular, plastid	2.5	2.2
Zm00001d043641_P001	Maize	endoplasmic reticulum, extracellular, plastid	2.5	2.2
Zm00001d043644_P001	Maize	endoplasmic reticulum, extracellular, plastid	2.5	2.2
CDY61273	Canola	plastid	11.25	1.49
GSMUA_Achr8P06430_001	Banana	extracellular	1.25	0.9
CDY69601	Canola	plasma membrane	1.25	0.29
CDY69568	Canola	plasma membrane	1.25	0.29

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	GO:A0A078DHP2	EnsemblPlants:CDX88482	ProteinID:CDX88482	ProteinID:CDX88482.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0009678	GO:GO:0016020	GO:GO:0016787	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00148029001
PFAM:PF03030	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF24	TMHMM:TMhelix	UniParc:UPI0004EDEA53

Description

BnaC06g39260D

Coordinates

chrLK031855:+:1233452..1234226

Molecular Weight (calculated)

8817.9 Da

IEP (calculated)

6.953

GRAVY (calculated)

0.200

Length

80 amino acids

Sequence
(BLAST)

1: MAYALEWITL KAGIQTVDVL TPKVVIGLLV GAMLPYWFPA MTMKSVGSAA LKMVEESEEA AQHHPGAHGR YCETRFMQHA

Best Arabidopsis Sequence Match ( AT1G15690.2 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATHGGILFK YF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.