Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83972 | Canola | plasma membrane | 99.35 | 99.35 |
| Bra016653.1-P | Field mustard | plasma membrane | 99.22 | 99.22 |
| CDY33390 | Canola | plasma membrane | 98.05 | 97.8 |
| CDY36581 | Canola | plasma membrane | 98.05 | 97.8 |
| AT1G15690.1 | Thale cress | plasma membrane | 95.84 | 95.71 |
| CDY53310 | Canola | plasma membrane | 97.66 | 93.64 |
| PGSC0003DMT400073438 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 34.72 | 92.71 |
| CDX87313 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 92.46 | 92.46 |
| CDY39975 | Canola | plasma membrane | 92.46 | 92.46 |
| PGSC0003DMT400036847 | Potato | plasma membrane | 89.86 | 90.09 |
| Solyc03g117480.2.1 | Tomato | nucleus, unclear | 89.21 | 89.44 |
| KRH44486 | Soybean | endoplasmic reticulum | 88.56 | 88.67 |
| KRH47417 | Soybean | nucleus | 88.43 | 88.54 |
| Solyc06g068240.2.1 | Tomato | plastid | 88.3 | 88.53 |
| KRH61103 | Soybean | endoplasmic reticulum, plasma membrane | 12.74 | 85.96 |
| CDY61273 | Canola | plastid | 53.32 | 67.66 |
| CDX81728 | Canola | plasma membrane | 97.92 | 64.14 |
| CDX88482 | Canola | endoplasmic reticulum | 6.63 | 63.75 |
| Zm00001d041187_P002 | Maize | cytosol, endoplasmic reticulum, golgi | 10.92 | 52.5 |
| CDY70021 | Canola | golgi, plasma membrane | 15.21 | 47.95 |
| CDY70253 | Canola | golgi, plasma membrane | 15.47 | 47.6 |
| CDX88491 | Canola | plasma membrane | 35.5 | 34.04 |
| CDX87422 | Canola | plasma membrane | 35.37 | 33.92 |
| CDY69601 | Canola | plasma membrane | 12.74 | 28.32 |
| CDY69568 | Canola | plasma membrane | 12.74 | 28.32 |
| CDY53311 | Canola | plastid | 7.54 | 16.67 |
Protein Annotations
| KEGG:00190+3.6.1.1 | MapMan:24.1.4.1 | GO:A0A078E493 | EnsemblPlants:CDX96835 | ProteinID:CDX96835 | ProteinID:CDX96835.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009678 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00103071001 | HAMAP:MF_01129 | PFAM:PF03030 | PIRSF:PIRSF001265 |
| InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF10 | TIGRFAMs:TIGR01104 | TMHMM:TMhelix | UniParc:UPI0004EECE29 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g23780D
Coordinates
chrLK031895:-:1139957..1143671
Molecular Weight (calculated)
80522.0 Da
IEP (calculated)
4.782
GRAVY (calculated)
0.616
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MVASAFLPEL WTEILIPVCA VVGIAFSLFQ WFIVSRVRVS ADQGASSSSS GGSKNGYGDY LIEEEEGVND QSVVAKCAEI QTAISEGATS FLFTESRYVG
101: VFMVIFAAII FVFLGSVEGF STENKPCTYD ETKTCKPALA TAAFSTIAFV LGAVTSVLSG FLGMKIATYA NARTTLEARK GVGKAFIVAF RSGAVMGFLL
201: AASGLLVLYV TINVFKIYYG DDWEGLFEAI TGYGLGGSSM ALFGRVGGGI YTKAADVGAD LVGKIERNIP EDDPRNPAVI ADNVGDNVGD IAGMGSDLFG
301: SYAEASCAAL VVASISSFGI NHDFTAMCYP LLISSMGILV CLITTLFATD FFEIKAVKEI EPALKNQLII STVIMTVGIA VVSWVGLPSS FTIFNFGTQK
401: VVQNWQLFLC VCVGLWAGLI IGFVTEYYTS NAYSPVQDVA DSCRTGAATN VIFGLALGYK SVIIPIFAIA VSIFVSFSFA AMYGVAVAAL GMLSTIATGL
501: AIDAYGPISD NAGGIAEMAG MSHRIRERTD ALDAAGNTTA AIGKGFAIGS AALVSLALFG AFVSRAGVHT VDVLTPKVII GLLVGAMLPY WFSAMTMKSV
601: GSAALKMVEE VRRQFNTIPG LMEGTAKPDY ATCVKISTDA SIKEMIPPGC LVMLTPLIVG FFFGVETLSG VLAGSLVSGV QIAISASNTG GAWDNAKKYI
701: EAGVSEHAKS LGPKGSEPHK AAVIGDTIGD PLKDTSGPSL NILIKLMAVE SLVFAPFFAT HGGILFKYL
101: VFMVIFAAII FVFLGSVEGF STENKPCTYD ETKTCKPALA TAAFSTIAFV LGAVTSVLSG FLGMKIATYA NARTTLEARK GVGKAFIVAF RSGAVMGFLL
201: AASGLLVLYV TINVFKIYYG DDWEGLFEAI TGYGLGGSSM ALFGRVGGGI YTKAADVGAD LVGKIERNIP EDDPRNPAVI ADNVGDNVGD IAGMGSDLFG
301: SYAEASCAAL VVASISSFGI NHDFTAMCYP LLISSMGILV CLITTLFATD FFEIKAVKEI EPALKNQLII STVIMTVGIA VVSWVGLPSS FTIFNFGTQK
401: VVQNWQLFLC VCVGLWAGLI IGFVTEYYTS NAYSPVQDVA DSCRTGAATN VIFGLALGYK SVIIPIFAIA VSIFVSFSFA AMYGVAVAAL GMLSTIATGL
501: AIDAYGPISD NAGGIAEMAG MSHRIRERTD ALDAAGNTTA AIGKGFAIGS AALVSLALFG AFVSRAGVHT VDVLTPKVII GLLVGAMLPY WFSAMTMKSV
601: GSAALKMVEE VRRQFNTIPG LMEGTAKPDY ATCVKISTDA SIKEMIPPGC LVMLTPLIVG FFFGVETLSG VLAGSLVSGV QIAISASNTG GAWDNAKKYI
701: EAGVSEHAKS LGPKGSEPHK AAVIGDTIGD PLKDTSGPSL NILIKLMAVE SLVFAPFFAT HGGILFKYL
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATHGGILFK YF
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATHGGILFK YF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.