CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69568	Canola	plasma membrane	98.84	98.84
Bra008386.1-P	Field mustard	plasma membrane	98.55	42.47
CDX87422	Canola	plasma membrane	96.53	41.65
CDX88491	Canola	plasma membrane	96.24	41.52
AT1G78920.2	Thale cress	plasma membrane	95.95	41.4
VIT_09s0054g00700.t01	Wine grape	plasma membrane	84.1	36.38
PGSC0003DMT400064558	Potato	plasma membrane	80.06	36.07
KRH46977	Soybean	endoplasmic reticulum	82.95	35.83
KRH44688	Soybean	plasma membrane	82.08	35.46
Zm00001d030996_P011	Maize	plasma membrane	79.77	34.54
EES17335	Sorghum	plasma membrane	79.77	34.54
Solyc04g071880.2.1	Tomato	nucleus, plastid	79.77	34.5
Os02t0537900-01	Rice	plasma membrane	78.9	34.17
Zm00001d041420_P003	Maize	plasma membrane	79.48	34.08
TraesCSU01G080600.1	Wheat	plasma membrane	77.46	33.54
HORVU6Hr1G083160.1	Barley	plasma membrane	77.46	33.54
TraesCS6D01G326300.1	Wheat	plasma membrane	77.46	33.54
TraesCS6B01G376400.1	Wheat	golgi	77.46	33.54
GSMUA_Achr5P13160_001	Banana	plasma membrane	77.17	32.25
CDX87313	Canola	endoplasmic reticulum, plasma membrane, vacuole	29.77	13.39
CDY39975	Canola	plasma membrane	29.77	13.39
CDX83972	Canola	plasma membrane	28.61	12.87
CDX96835	Canola	plasma membrane	28.32	12.74
CDY36581	Canola	plasma membrane	28.32	12.71
CDY33390	Canola	plasma membrane	28.32	12.71
CDY53310	Canola	plasma membrane	28.9	12.47
CDY61273	Canola	plastid	21.1	12.05
CDX81728	Canola	plasma membrane	28.61	8.43
CDY53311	Canola	plastid	2.31	2.3
CDX88482	Canola	endoplasmic reticulum	0.29	1.25
GSMUA_Achr1P01170_001	Banana	cytosol, plasma membrane, vacuole	0.58	0.67
CDY70253	Canola	golgi, plasma membrane	0.0	0.0
CDY70021	Canola	golgi, plasma membrane	0.0	0.0

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	GO:A0A078JVN2	UniProt:A0A078JVN2	EnsemblPlants:CDY69601	ProteinID:CDY69601
ProteinID:CDY69601.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00089212001	PFAM:PF03030	InterPro:PPase-energised_H-pump
PANTHER:PTHR31998	PANTHER:PTHR31998:SF11	TMHMM:TMhelix	UniParc:UPI0004EE2A47	SEG:seg	:

Description

BnaCnng64390DBnaCnng64390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVN2]

Coordinates

chrLK039827:-:275..2683

Molecular Weight (calculated)

36996.8 Da

IEP (calculated)

5.444

GRAVY (calculated)

0.659

Length

346 amino acids

Sequence
(BLAST)

001: MMMDEDVEQA SLLSFNDRPR AFPNMRSKTY SPLIFRILRR LNVRVLSIIL LICFGVIFFM GASTSPIILF VFTVCIISFL LSLYLTKWVL AKDEGPPEMV
101: QISDAIRDGA EGFFRTQYST ISKMAILLAF VILCIYLFRS LTPQQEAAGL GRAMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VLLGVDDSPG SMSVNDLPLL LVGYGFGASF VALFAQLGGG IYTKGADVGA DLVGKVEQGI PEDDPRNPAV
301: IADLVGDNVG DCAARGADLF ESIAAEIISA MILGGTMAKK CKIEGM

Best Arabidopsis Sequence Match ( AT1G78920.1 )
(BLAST)

001: MMMDEDVEQA SLMSFNDRPR AFPNMRSKTY SPLIFRIIRK LNVRVLSIIL LFCFGAIFYM GASTSPIIVF VFTVCIISFL LSIYLTKWVL AKDEGPPEMV
101: EISDAIRDGA EGFFRTQYST ISKMAILLAF VILCIYLFRS LTPQQEAAGL GRAMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLGVGSPGS MNVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEQGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAKKC KIEDPSGFIL FPLVVHSFDL IISSIGILSI KGTRDASVKS PVEDPMAVLQ KGYSLTIILA
401: VITFGASTRW LLYTEQAPSA WFNFALCGLV GIITAYIFVW ISKYYTDYKH EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLTISVAI ISAYWLGNTS
501: GLVDENGIPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DLLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFVGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIME YKEKPDYSRC VAIVASAALR EMIKPGALAI ASPIVVGLVF
701: RILGYYTGQP LLGAKVVASM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSE AHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPV
801: FL

Arabidopsis Description

AVPL1Pyrophosphate-energized membrane proton pump 2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZN6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.