Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33390 | Canola | plasma membrane | 99.74 | 99.74 |
| Bra026115.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 99.09 | 99.09 |
| CDX83972 | Canola | plasma membrane | 97.92 | 98.18 |
| CDX96835 | Canola | plasma membrane | 97.8 | 98.05 |
| AT1G15690.1 | Thale cress | plasma membrane | 96.24 | 96.36 |
| CDY53310 | Canola | plasma membrane | 97.54 | 93.77 |
| PGSC0003DMT400073438 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 34.63 | 92.71 |
| CDX87313 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 91.83 | 92.07 |
| CDY39975 | Canola | plasma membrane | 91.83 | 92.07 |
| PGSC0003DMT400036847 | Potato | plasma membrane | 90.01 | 90.48 |
| Solyc03g117480.2.1 | Tomato | nucleus, unclear | 89.36 | 89.83 |
| KRH44486 | Soybean | endoplasmic reticulum | 88.98 | 89.32 |
| KRH47417 | Soybean | nucleus | 88.85 | 89.19 |
| Solyc06g068240.2.1 | Tomato | plastid | 88.2 | 88.66 |
| KRH61103 | Soybean | endoplasmic reticulum, plasma membrane | 12.97 | 87.72 |
| CDY61273 | Canola | plastid | 52.92 | 67.33 |
| CDX81728 | Canola | plasma membrane | 97.8 | 64.22 |
| CDX88482 | Canola | endoplasmic reticulum | 6.61 | 63.75 |
| Zm00001d041187_P002 | Maize | cytosol, endoplasmic reticulum, golgi | 10.89 | 52.5 |
| CDY70021 | Canola | golgi, plasma membrane | 15.18 | 47.95 |
| CDY70253 | Canola | golgi, plasma membrane | 15.43 | 47.6 |
| CDX88491 | Canola | plasma membrane | 35.28 | 33.92 |
| CDX87422 | Canola | plasma membrane | 35.15 | 33.79 |
| CDY69601 | Canola | plasma membrane | 12.71 | 28.32 |
| CDY69568 | Canola | plasma membrane | 12.71 | 28.32 |
| CDY53311 | Canola | plastid | 7.52 | 16.67 |
Protein Annotations
| KEGG:00190+3.6.1.1 | MapMan:24.1.4.1 | GO:A0A078HFQ8 | UniProt:A0A078HFQ8 | EnsemblPlants:CDY36581 | ProteinID:CDY36581 |
| ProteinID:CDY36581.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009678 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00062272001 | HAMAP:MF_01129 | PFAM:PF03030 |
| PIRSF:PIRSF001265 | InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF10 | TIGRFAMs:TIGR01104 | TMHMM:TMhelix |
| UniParc:UPI0004EEA56D | SEG:seg | : | : | : | : |
Description
BnaA06g10340DBnaA06g10340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFQ8]
Coordinates
chrLK032378:+:275698..279054
Molecular Weight (calculated)
80837.5 Da
IEP (calculated)
4.839
GRAVY (calculated)
0.621
Length
771 amino acids
Sequence
(BLAST)
(BLAST)
001: MVALAFLPEL WTEILIPVCA VVGIVFSLFQ WFIVSRVRVS ADQGASSSSG GANNGKNGYG DYLIEEEEGV NDQSVVAKCA EIQTAISEGA TSFLFTEYRY
101: VGVFMVIFAA IIFVFLGSVE GFSTENKPCT YDDTKTCKPA LATAAFSTIA FILGAVTSVL SGFLGMKIAT YANARTTLEA RKGVGKAFIV AFRSGAVMGF
201: LLAASGLLVL YITINVFKIY YGEDWEGLFE AITGYGLGGS SMALFGRVGG GIYTKAADVG ADLVGKIERN IPEDDPRNPA VIADNVGDNV GDIAGMGSDL
301: FGSYAEASCA ALVVASISSF GINHDFTAMC YPLLISSMGI LVCLITTLFA TDFFEIKAVK EIEPALKNQL IISTVIMTVG IAIVSYVGLP SSFTIFNFGA
401: QKVVKNWQLF LCVCVGLWAG LIIGFVTEYY TSNAYSPVQD VADSCRTGAA TNVIFGLALG YKSVIIPIFA IAISIFVSFS FAAMYGVAVA ALGMLSTIAT
501: GLAIDAYGPI SDNAGGIAEM AGMSHRIRER TDALDAAGNT TAAIGKGFAI GSAALVSLAL FGAFVSRAGV HTVDVLTPKV IIGLLVGAML PYWFSAMTMK
601: SVGSAALKMV EEVRRQFNTI PGLMEGTAKP DYATCVKIST DASIKEMIPP GCLVMLTPLI VGFFFGVETL SGVLAGSLVS GVQIAISASN TGGAWDNAKK
701: YIEAGVSEHA KSLGPKGSEP HKAAVIGDTI GDPLKDTSGP SLNILIKLMA VESLVFAPFF ATHGGILFKY L
101: VGVFMVIFAA IIFVFLGSVE GFSTENKPCT YDDTKTCKPA LATAAFSTIA FILGAVTSVL SGFLGMKIAT YANARTTLEA RKGVGKAFIV AFRSGAVMGF
201: LLAASGLLVL YITINVFKIY YGEDWEGLFE AITGYGLGGS SMALFGRVGG GIYTKAADVG ADLVGKIERN IPEDDPRNPA VIADNVGDNV GDIAGMGSDL
301: FGSYAEASCA ALVVASISSF GINHDFTAMC YPLLISSMGI LVCLITTLFA TDFFEIKAVK EIEPALKNQL IISTVIMTVG IAIVSYVGLP SSFTIFNFGA
401: QKVVKNWQLF LCVCVGLWAG LIIGFVTEYY TSNAYSPVQD VADSCRTGAA TNVIFGLALG YKSVIIPIFA IAISIFVSFS FAAMYGVAVA ALGMLSTIAT
501: GLAIDAYGPI SDNAGGIAEM AGMSHRIRER TDALDAAGNT TAAIGKGFAI GSAALVSLAL FGAFVSRAGV HTVDVLTPKV IIGLLVGAML PYWFSAMTMK
601: SVGSAALKMV EEVRRQFNTI PGLMEGTAKP DYATCVKIST DASIKEMIPP GCLVMLTPLI VGFFFGVETL SGVLAGSLVS GVQIAISASN TGGAWDNAKK
701: YIEAGVSEHA KSLGPKGSEP HKAAVIGDTI GDPLKDTSGP SLNILIKLMA VESLVFAPFF ATHGGILFKY L
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.