Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035179.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 99.61 | 99.61 |
| CDY39975 | Canola | plasma membrane | 99.22 | 99.22 |
| PGSC0003DMT400073438 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 34.98 | 93.4 |
| CDX83972 | Canola | plasma membrane | 92.46 | 92.46 |
| CDX96835 | Canola | plasma membrane | 92.46 | 92.46 |
| CDY36581 | Canola | plasma membrane | 92.07 | 91.83 |
| CDY33390 | Canola | plasma membrane | 91.94 | 91.7 |
| PGSC0003DMT400036847 | Potato | plasma membrane | 90.25 | 90.48 |
| Solyc03g117480.2.1 | Tomato | nucleus, unclear | 89.73 | 89.96 |
| KRH44486 | Soybean | endoplasmic reticulum | 89.6 | 89.71 |
| KRH47417 | Soybean | nucleus | 89.47 | 89.58 |
| Solyc06g068240.2.1 | Tomato | plastid | 88.56 | 88.79 |
| CDY53310 | Canola | plasma membrane | 92.2 | 88.4 |
| KRH61103 | Soybean | endoplasmic reticulum, plasma membrane | 12.87 | 86.84 |
| CDY61273 | Canola | plastid | 56.96 | 72.28 |
| CDX88482 | Canola | endoplasmic reticulum | 6.89 | 66.25 |
| CDX81728 | Canola | plasma membrane | 92.46 | 60.56 |
| Zm00001d041187_P002 | Maize | cytosol, endoplasmic reticulum, golgi | 11.18 | 53.75 |
| CDY70021 | Canola | golgi, plasma membrane | 15.21 | 47.95 |
| CDY70253 | Canola | golgi, plasma membrane | 15.47 | 47.6 |
| CDX88491 | Canola | plasma membrane | 36.41 | 34.91 |
| CDX87422 | Canola | plasma membrane | 36.28 | 34.79 |
| CDY69601 | Canola | plasma membrane | 13.39 | 29.77 |
| CDY69568 | Canola | plasma membrane | 13.39 | 29.77 |
| CDY53311 | Canola | plastid | 7.67 | 16.95 |
Protein Annotations
| KEGG:00190+3.6.1.1 | MapMan:24.1.4.1 | GO:A0A078DJ69 | EnsemblPlants:CDX87313 | ProteinID:CDX87313 | ProteinID:CDX87313.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009678 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00146278001 |
| HAMAP:MF_01129 | PFAM:PF03030 | PIRSF:PIRSF001265 | InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF10 |
| TIGRFAMs:TIGR01104 | TMHMM:TMhelix | UniParc:UPI0004EE5263 | : | : | : |
Description
BnaA07g35600D
Coordinates
chrLK031850:+:127954..131209
Molecular Weight (calculated)
80709.1 Da
IEP (calculated)
4.755
GRAVY (calculated)
0.572
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGKALLPEL WTEILVPVCA VVGIAFSLFQ WYIVSGVKLT ADRGASSESE DAKNGNEDYL IEEEEGVNDE SVVAKCAEIQ TAISEGATSF LFTEYKYVGV
101: FMVLFAAIIF LFLGSVQGFS TKSQPCTYDK TRTCKPALAT AVFSTISFVL GAVTSVLSGF LGMKIATYAN ARTTLEARRG VGKAFIVAFR SGAVMGFLLA
201: ANGLLVLYIT INLFKIYYGD DWEGLFESIT GYGLGGSSMA LFGRVGGGIY TKAADVGADL VGKVERNIPE DDPRNPAVIA DNVGDNVGDI AGMGSDLFGS
301: YAESSCAALV VASISSFGIN HDFTAMLFPL LISSVGILVC LITTLYATDI SEIKAVKEIE PALKNQLIIS TVIMTAGIAL VSWIGLPSSF TIFNFGTQKV
401: VKNWELFLCV AVGLWAGLII GFVTEYYTSN AYSPVQDVAD SCRTGAATNV IFGLALGYKS VIIPIFAIAV SIFVSFSFAA MYGVAVAALG MLSTIATGLA
501: IDAYGPISDN AGGIAEMAGM SHRIRERTDA LDAAGNTTAA IGKGFAIGSA ALVSLALFGA FVSRAGVQTV DVLTPKVVIG LLVGAMLPYW FSAMTMKSVG
601: SAALKMVEEV RRQFNTIPGL MEGTAKPDYA TCVKISTDAS IKEMIPPGCL VMLTPLIVGF FFGVETLSGV LAGSLVSGVQ IAISASNTGG AWDNAKKYIE
701: AGASEHARSL GPKGSEPHKA AVIGDTIGDP LKDTSGPSLN ILIKLMAVES LVFAPFFATH GGFLFRIFS
101: FMVLFAAIIF LFLGSVQGFS TKSQPCTYDK TRTCKPALAT AVFSTISFVL GAVTSVLSGF LGMKIATYAN ARTTLEARRG VGKAFIVAFR SGAVMGFLLA
201: ANGLLVLYIT INLFKIYYGD DWEGLFESIT GYGLGGSSMA LFGRVGGGIY TKAADVGADL VGKVERNIPE DDPRNPAVIA DNVGDNVGDI AGMGSDLFGS
301: YAESSCAALV VASISSFGIN HDFTAMLFPL LISSVGILVC LITTLYATDI SEIKAVKEIE PALKNQLIIS TVIMTAGIAL VSWIGLPSSF TIFNFGTQKV
401: VKNWELFLCV AVGLWAGLII GFVTEYYTSN AYSPVQDVAD SCRTGAATNV IFGLALGYKS VIIPIFAIAV SIFVSFSFAA MYGVAVAALG MLSTIATGLA
501: IDAYGPISDN AGGIAEMAGM SHRIRERTDA LDAAGNTTAA IGKGFAIGSA ALVSLALFGA FVSRAGVQTV DVLTPKVVIG LLVGAMLPYW FSAMTMKSVG
601: SAALKMVEEV RRQFNTIPGL MEGTAKPDYA TCVKISTDAS IKEMIPPGCL VMLTPLIVGF FFGVETLSGV LAGSLVSGVQ IAISASNTGG AWDNAKKYIE
701: AGASEHARSL GPKGSEPHKA AVIGDTIGDP LKDTSGPSLN ILIKLMAVES LVFAPFFATH GGFLFRIFS
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.