Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018135.1-P | Field mustard | plastid | 98.02 | 77.55 |
| VIT_09s0002g07940.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 38.61 | 59.24 |
| VIT_09s0002g07920.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 36.14 | 58.4 |
| CDX87313 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.28 | 56.96 |
| CDY39975 | Canola | plasma membrane | 72.28 | 56.96 |
| VIT_09s0002g08010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 24.09 | 56.37 |
| VIT_09s0002g07880.t01 | Wine grape | extracellular | 67.49 | 53.32 |
| CDX83972 | Canola | plasma membrane | 67.66 | 53.32 |
| CDX96835 | Canola | plasma membrane | 67.66 | 53.32 |
| CDY36581 | Canola | plasma membrane | 67.33 | 52.92 |
| CDY33390 | Canola | plasma membrane | 67.16 | 52.79 |
| VIT_11s0118g00350.t01 | Wine grape | plasma membrane | 66.5 | 52.75 |
| CDY53310 | Canola | plasma membrane | 67.66 | 51.12 |
| CDX81728 | Canola | plasma membrane | 67.66 | 34.92 |
| Zm00001d041187_P002 | Maize | cytosol, endoplasmic reticulum, golgi | 8.75 | 33.12 |
| CDY70253 | Canola | golgi, plasma membrane | 10.4 | 25.2 |
| CDY70021 | Canola | golgi, plasma membrane | 10.07 | 25.0 |
| CDX88491 | Canola | plasma membrane | 30.2 | 22.82 |
| CDX87422 | Canola | plasma membrane | 30.03 | 22.69 |
| CDY69601 | Canola | plasma membrane | 12.05 | 21.1 |
| CDY69568 | Canola | plasma membrane | 11.88 | 20.81 |
| CDX88482 | Canola | endoplasmic reticulum | 1.49 | 11.25 |
| CDY53311 | Canola | plastid | 6.11 | 10.63 |
Protein Annotations
| KEGG:00190+3.6.1.1 | MapMan:35.1 | GO:A0A078JB54 | UniProt:A0A078JB54 | EnsemblPlants:CDY61273 | ProteinID:CDY61273 |
| ProteinID:CDY61273.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009678 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00033628001 | PFAM:PF03030 | PIRSF:PIRSF001265 |
| InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF10 | TMHMM:TMhelix | UniParc:UPI0004EEDB7E | SEG:seg |
Description
BnaA06g38620DBnaA06g38620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB54]
Coordinates
chrLK033977:+:26368..30480
Molecular Weight (calculated)
64612.0 Da
IEP (calculated)
4.787
GRAVY (calculated)
0.281
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGPSLPPDV PNLLMAAPSS STVVLSSSPV ALNLLMAASS LPLDVPSSSS LWLGMIFANS SASATGTTLS LEMSNGLHWA YLGVLWRETH RRSWREDGKN
101: GNEDYLIEEE EGVNDESVVA KCAEIQTAIS EGATSFLFTE YKYVGVFMVL FAAIIFLFLG SVQGFSTKSQ PCTYDKTRTC KPALATAVFS TISFVLSPLW
201: LSRDEDRHLR QRQNHSGSEE RRWLFTTVMT GKVSLSPSLV MGLVDLPWRS LVELVVGSTL DVGADLVGKV ERNIPEDDPR NPAVIADNVG DNVGDIAGMG
301: SDLFGSYAES SCAALVVASI SSFGINHVVP IAHQFSGNLA HYFDGYHDCW NSSSVVDWVT IFNFGTQKVV KNWELFLCVA VGLWAGLIIG FVTEYYTSNA
401: YSPVQDVADS CRTGAATNVI FGLALGYKSV IIPIFAIAVS IFVSFSFAAM YGVAVAALGM LSTIATGLAI DAYGPISDNA GSIAEMAGMS HRIRERTDAL
501: DAAIGKDFAI GSAALVSLAL FASNTGGAWD NAKKYIEPGA SEHARSLGPK GSEPHKAAVI GDTIGDPLKD TSGPSLNILI KLMAVESLVF APFFATHGGF
601: LFRIFS
101: GNEDYLIEEE EGVNDESVVA KCAEIQTAIS EGATSFLFTE YKYVGVFMVL FAAIIFLFLG SVQGFSTKSQ PCTYDKTRTC KPALATAVFS TISFVLSPLW
201: LSRDEDRHLR QRQNHSGSEE RRWLFTTVMT GKVSLSPSLV MGLVDLPWRS LVELVVGSTL DVGADLVGKV ERNIPEDDPR NPAVIADNVG DNVGDIAGMG
301: SDLFGSYAES SCAALVVASI SSFGINHVVP IAHQFSGNLA HYFDGYHDCW NSSSVVDWVT IFNFGTQKVV KNWELFLCVA VGLWAGLIIG FVTEYYTSNA
401: YSPVQDVADS CRTGAATNVI FGLALGYKSV IIPIFAIAVS IFVSFSFAAM YGVAVAALGM LSTIATGLAI DAYGPISDNA GSIAEMAGMS HRIRERTDAL
501: DAAIGKDFAI GSAALVSLAL FASNTGGAWD NAKKYIEPGA SEHARSLGPK GSEPHKAAVI GDTIGDPLKD TSGPSLNILI KLMAVESLVF APFFATHGGF
601: LFRIFS
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.