Factsheet for VIT_11s0118g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
vacuole 5
extracellular 3
endoplasmic reticulum 4
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07920.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	47.12	96.0
VIT_09s0002g07940.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	49.48	95.7
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	35.08	93.06
VIT_09s0002g07880.t01	Wine grape	extracellular	91.62	91.26
KRH47417	Soybean	nucleus	90.71	90.23
KRH44486	Soybean	endoplasmic reticulum	90.44	89.97
PGSC0003DMT400036847	Potato	plasma membrane	90.05	89.7
Solyc06g068240.2.1	Tomato	plastid	89.92	89.57
Solyc03g117480.2.1	Tomato	nucleus, unclear	89.66	89.31
KRH61103	Soybean	endoplasmic reticulum, plasma membrane	13.09	87.72
VIT_09s0002g08010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	29.71	87.64
AT1G15690.1	Thale cress	plasma membrane	87.3	86.62
VIT_14s0060g01280.t01	Wine grape	golgi, plasma membrane, vacuole	83.77	84.32
Bra018135.1-P	Field mustard	plastid	67.54	67.36
CDY61273	Canola	plastid	52.75	66.5
VIT_01s0026g01410.t01	Wine grape	golgi, plasma membrane, vacuole	12.83	59.76
Zm00001d041187_P002	Maize	cytosol, endoplasmic reticulum, golgi	10.86	51.88
VIT_09s0054g00700.t01	Wine grape	plasma membrane	38.22	36.5

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100232894	wikigene:100232894	MapMan:24.1.4.1	EMBL:AJ544719	EMBL:AJ557256
EMBL:AM453088	ProteinID:CAD89675	ProteinID:CAD89675.2	ProteinID:CAD90116	ProteinID:CAD90116.1	ProteinID:CAN65456
ProteinID:CAN65456.1	ProteinID:CBI25554	ProteinID:CBI25554.3	UniProt:D7T4X2	EMBL:FN595515	GO:GO:0003674
GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0009678	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085
GO:GO:1902600	HAMAP:MF_01129	PFAM:PF03030	PIRSF:PIRSF001265	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998
PANTHER:PTHR31998:SF10	TIGR:TC51758	TIGRFAMs:TIGR01104	TMHMM:TMhelix	UniParc:UPI00015CC6D5	ArrayExpress:VIT_11s0118g00350
EnsemblPlantsGene:VIT_11s0118g00350	EnsemblPlants:VIT_11s0118g00350.t01	EntrezGene:VPP2	wikigene:VPP2	unigene:Vvi.6734	SEG:seg

Description

No Description!

Coordinates

chr11:+:6011013..6016779

Molecular Weight (calculated)

80158.9 Da

IEP (calculated)

5.051

GRAVY (calculated)

0.595

Length

764 amino acids

Sequence
(BLAST)

001: MAILSDLGTE ILVPACAIVG IVFSVVQWIL VSRVKLSPER HSLSNSSKNG TAEYLIEEEE GLNDHSVVQK CAEIQNAISE GATSFLYTEY QYVGIFMVAF
101: AILIFVFLGS VEGFSTKSQP CLYNKGEMCK PALANAIFST ISFLLGGLTS LLSGFLGMKI ATYANARTTL EARKGVGKAF ITAFRSGAVM GFLLAANGLL
201: VLYIAINLFE IYYGDDWEGL YEAITGYGLG GSSMALFGRV GGGIYTKAAD VGADLVGKVE RGIPEDDPRN PAVIADNVGD NVGDIAGMGA DLFGSYAESS
301: CAALVVASIS SFGINHEMTA MFYPLIISSI GILVCLITTL FATDFFEIKA VKEIEPALKK QLIISTILMT AGIAFVSWIA LPSSFTIFNF GSQKVVKNWQ
401: LFLCVGVGLW AGLIIGFVTE YYTSNTYSPV QDVADSCRTG AATNVIFGLA LGYKSVIIPI FAIAVSIFVS FSFAAMYGIA VAALGMLSTI ATGLAIDAYG
501: PISDNAGGIA EMAGMSHRIR ERTDALDAAG NTTAAIGKGF AIGSAALVSL ALFGAFVSRA AISTVDVLTP KVFIGLLVGA MLPYWFSAMT MKSVGSAALK
601: MVEEVRRQFN TIPGLMEGTA KPDYATCVKI STDASIKEMI PPGALVMLTP LIVGTLLGVE TLAGVLAGSL VSGVQIAISA SNTGGAWDNA KKYIEAGASE
701: HAKALGPKGS DPHKAAVIGD TIGDPLKDTS GPSLNILIKL MAVESLVFAP FFAAHGGLLF KIWK

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.