Factsheet for PGSC0003DMT400036847

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
vacuole 5
extracellular 3
endoplasmic reticulum 4
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g117480.2.1	Tomato	nucleus, unclear	98.44	98.44
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	36.64	97.57
VIT_09s0002g07920.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	46.55	95.2
VIT_09s0002g07940.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	48.89	94.94
VIT_09s0002g07880.t01	Wine grape	extracellular	93.09	93.09
KRH47417	Soybean	nucleus	92.83	92.71
KRH44486	Soybean	endoplasmic reticulum	92.83	92.71
PGSC0003DMT400078835	Potato	extracellular	90.35	90.59
CDX87313	Canola	endoplasmic reticulum, plasma membrane, vacuole	90.48	90.25
AT1G15690.1	Thale cress	plasma membrane	90.48	90.13
CDY39975	Canola	plasma membrane	90.35	90.12
VIT_11s0118g00350.t01	Wine grape	plasma membrane	89.7	90.05
CDY36581	Canola	plasma membrane	90.48	90.01
CDX83972	Canola	plasma membrane	90.22	89.99
PGSC0003DMT400020475	Potato	endoplasmic reticulum, plasma membrane, vacuole	90.22	89.99
Bra035179.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	90.22	89.99
CDY33390	Canola	plasma membrane	90.35	89.88
CDX96835	Canola	plasma membrane	90.09	89.86
Bra026115.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	89.96	89.49
Bra016653.1-P	Field mustard	plasma membrane	89.7	89.47
KRH61103	Soybean	endoplasmic reticulum, plasma membrane	13.04	87.72
CDY53310	Canola	plasma membrane	90.48	86.53
VIT_09s0002g08010.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	28.68	84.94
PGSC0003DMT400007173	Potato	plasma membrane	82.66	83.31
PGSC0003DMT400005448	Potato	plasma membrane	13.69	69.54
PGSC0003DMT400045710	Potato	cytosol	10.3	63.71
CDX81728	Canola	plasma membrane	90.61	59.2
Zm00001d041187_P002	Maize	cytosol, endoplasmic reticulum, golgi	10.82	51.88
PGSC0003DMT400064558	Potato	plasma membrane	33.77	33.72

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:102583477	MapMan:24.1.4.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	UniProt:M1B4C0
HAMAP:MF_01129	PFAM:PF03030	EnsemblPlantsGene:PGSC0003DMG400014208	PGSC:PGSC0003DMG400014208	EnsemblPlants:PGSC0003DMT400036847	PIRSF:PIRSF001265
InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10	TIGRFAMs:TIGR01104	TMHMM:TMhelix	UniParc:UPI0002968787
RefSeq:XP_006341399.1	SEG:seg	:	:	:	:

Description

Inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400014208]

Coordinates

chr3:-:57193005..57197878

Molecular Weight (calculated)

80653.5 Da

IEP (calculated)

4.844

GRAVY (calculated)

0.600

Length

767 amino acids

Sequence
(BLAST)

001: MGSALLPDLG TEIVIPVCAV VGIVFSLFQW YLVSRVKVSS ERGATSPSNN NKNGYGDYLI EEEEGINDQN VVAKCAEIQN AISEGATSFL FTEYQYVGIF
101: MIAFAILIFL FLGSVEGFST KGQPCTYNKE KMCKPALATA IFSTISFLLG AVTSVISGFL GMKIATYANA RTTLEARKGV GKAFIVAFRS GAVMGFLLAA
201: NGLLVLYIAI NLFKLYYGDD WEGLFEAITG YGLGGSSMAL FGRVGGGIYT KAADVGADLV GKVERNIPED DPRNPAVIAD NVGDNVGDIA GMGSDLFGSY
301: AESSCAALVV ASISSFGIEH DFTSMCYPLL ISSMGILVCL ITTLFATDFF EIKAVKEIEP ALKNQLIIST VLMTIGIAIV TWTCLPSSFT IFNFGTQKVV
401: KNWELFLCVA VGLWAGLIIG FVTEYYTSNA YSPVQDVADS CRTGAATNVI FGLALGYKSV IIPIFAIAIA IFVSFSFAAM YGIAVAALGM LSTIATGLAI
501: DAYGPISDNA GGIAEMAGMS HRIRERTDAL DAAGNTTAAI GKGFAIGSAA LVSLALFGAF VSRAAISTVD VLTPKVFIGL IVGAMLPYWF SAMTMKSVGS
601: AALKMVEEVR RQFNTIPGLM EGLAKPDYAT CVKISTDASI KEMIPPGALV MLTPLIVGIF FGVETLSGVL AGALVSGVQI AISASNTGGA WDNAKKYIEA
701: GASEHARTLG PKGSEPHKAA VIGDTIGDPL KDTSGPSLNI LIKLMAVESL VFAPFFATHG GILFKIF

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.