Factsheet for PGSC0003DMT400078835

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 1
vacuole 6
extracellular 4
endoplasmic reticulum 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007600.2.1	Tomato	nucleus, plastid	98.95	98.95
Os02t0184200-01	Rice	plasma membrane	39.74	96.82
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	35.56	94.44
PGSC0003DMT400020475	Potato	endoplasmic reticulum, plasma membrane, vacuole	94.51	94.02
KRH20199	Soybean	nucleus	92.29	92.29
KRH03609	Soybean	plasma membrane	90.85	92.18
Zm00001d007132_P001	Maize	extracellular, golgi, vacuole	13.73	91.3
PGSC0003DMT400036847	Potato	plasma membrane	90.59	90.35
EES06395	Sorghum	plasma membrane	87.32	87.21
Zm00001d015569_P001	Maize	plasma membrane	87.06	86.95
Zm00001d046591_P001	Maize	plasma membrane	87.06	86.38
TraesCS7A01G517700.2	Wheat	golgi	86.14	85.03
Os06t0644200-01	Rice	plasma membrane	86.8	84.91
TraesCS7D01G507600.1	Wheat	golgi	86.01	84.9
TraesCS7B01G433800.1	Wheat	plastid, unclear	86.01	84.79
OQU76770	Sorghum	plasma membrane	87.32	83.29
PGSC0003DMT400007173	Potato	plasma membrane	82.22	82.65
HORVU7Hr1G115540.9	Barley	golgi, plasma membrane, plastid	86.41	81.3
Zm00001d023416_P001	Maize	golgi, peroxisome, plasma membrane	32.81	78.19
Zm00001d053727_P003	Maize	plasma membrane	86.93	77.42
Zm00001d021760_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.85	75.88
Zm00001d041315_P001	Maize	plastid	70.46	75.17
PGSC0003DMT400005448	Potato	plasma membrane	13.99	70.86
Zm00001d012070_P001	Maize	plastid	31.76	66.03
PGSC0003DMT400045710	Potato	cytosol	10.2	62.9
Zm00001d003860_P002	Maize	mitochondrion	31.11	59.06
Zm00001d032330_P001	Maize	plastid	32.81	52.51
PGSC0003DMT400064558	Potato	plasma membrane	33.73	33.59

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:102579479	MapMan:24.1.4.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	UniProt:M1D0T5
HAMAP:MF_01129	PFAM:PF03030	EnsemblPlantsGene:PGSC0003DMG400030682	PGSC:PGSC0003DMG400030682	EnsemblPlants:PGSC0003DMT400078835	PIRSF:PIRSF001265
InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF10	TIGRFAMs:TIGR01104	TMHMM:TMhelix	UniParc:UPI000295A780
RefSeq:XP_006359496.1	SEG:seg	:	:	:	:

Description

Inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400030682]

Coordinates

chr7:-:3505069..3509911

Molecular Weight (calculated)

80242.0 Da

IEP (calculated)

4.900

GRAVY (calculated)

0.613

Length

765 amino acids

Sequence
(BLAST)

001: MGVTILTDLG MEILIPICAV IGIAFSLFQW HLVSKVTVGT DKPHSSGDDK NGYAESLIEE EEGINDHNVV QKCAEIQNAI SEGATSFLFT MYQYVGVFMV
101: AFAILIFVFL GSVEGFSTKD QPCTYDSTKT CKPALATAVF STISFLLGAV TSVVSGFLGM KIATYANART TLEARKGVGK AFIVAFRSGA VMGFLLAANG
201: LLVLFITILL FKMYYGDDWE GLFEAITGYG LGGSSMALFG RVGGGIYTKA ADVGADLVGK VERNIPEDDP RNPAVIADNV GDNVGDIAGM GSDLFGSYAE
301: SSCAALVVAS ISSFGVNHEL TAMLYPLLIS SVGILVCLLT TLFATDFFEV KAVKEIEPAL KKQLIISTAL MTIGIAFVSW IALPSTFTIF NFGVQKEVKN
401: WQLFLCVGVG LWAGLIIGFV TEYYTSNAYS PVQDVADSCR TGAATNVIFG LALGYKSVII PIFAIAISIF VSFSFAAMYG IAVAALGMLS TIATGLAIDA
501: YGPISDNAGG IAEMAGMSHR IRERTDALDA AGNTTAAIGK GFAIGSAALV SLALFGAFVS RAAISTVDVL TPKVFIGLLV GAMLPYWFSA MTMKSVGSAA
601: LKMVEEVRRQ FNTIPGLMEG TAKPDYATCV KISTDASIKE MIPPGALVML TPLIVGILFG VETLSGVLAG SLVSGVQIAI SASNTGGAWD NAKKYIEAGA
701: SEHARTLGPK GSDAHKAAVI GDTVGDPLKD TSGPSLNILI KLMAVESLVF APFFATHGGL LFKLF

Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.