Factsheet for PGSC0003DMT400045710

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 3
cytosol 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043448_P001	Maize	endoplasmic reticulum, extracellular	13.71	73.91
PGSC0003DMT400005448	Potato	plasma membrane	82.26	67.55
PGSC0003DMT400073438	Potato	endoplasmic reticulum, plasma membrane, vacuole	48.39	20.83
HORVU0Hr1G032070.1	Barley	cytosol, peroxisome, vacuole	47.58	17.05
HORVU7Hr1G114250.2	Barley	endoplasmic reticulum	48.39	13.73
HORVU0Hr1G028950.5	Barley	plasma membrane	46.77	12.5
HORVU0Hr1G032540.1	Barley	endoplasmic reticulum, plasma membrane	46.77	12.42
PGSC0003DMT400007173	Potato	plasma membrane	65.32	10.64
PGSC0003DMT400036847	Potato	plasma membrane	63.71	10.3
PGSC0003DMT400078835	Potato	extracellular	62.9	10.2
PGSC0003DMT400020475	Potato	endoplasmic reticulum, plasma membrane, vacuole	62.9	10.14
PGSC0003DMT400064558	Potato	plasma membrane	36.29	5.86
HORVU5Hr1G076290.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	15.32	3.45

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020
GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	UniProt:M1BI22	PFAM:PF03030	EnsemblPlantsGene:PGSC0003DMG400017725
PGSC:PGSC0003DMG400017725	EnsemblPlants:PGSC0003DMT400045710	InterPro:PPase-energised_H-pump	PANTHER:PTHR31998	PANTHER:PTHR31998:SF24	UniParc:UPI000294DF4E

Description

Vacuolar H+-pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400017725]

Coordinates

chr4:+:62952813..62956568

Molecular Weight (calculated)

13131.6 Da

IEP (calculated)

4.182

GRAVY (calculated)

0.095

Length

124 amino acids

Sequence
(BLAST)

001: MFSVDYNLSP VQEAADSCKT GAATNLSYVW HCKLNAALGM LSTIATGLAI DAYGPINDNA GGIAEMAGMS HSIREKIDAL DAAGNTTAAI GKILKIEVTS
101: QDASLEDAKD YYYFAMEVMQ NLIS

Best Arabidopsis Sequence Match ( AT1G15690.2 )
(BLAST)

001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATHGGILFK YF

Arabidopsis Description

AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.