Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36581 | Canola | plasma membrane | 96.36 | 96.24 |
| CDX83972 | Canola | plasma membrane | 96.1 | 96.23 |
| CDY33390 | Canola | plasma membrane | 96.23 | 96.11 |
| CDX96835 | Canola | plasma membrane | 95.71 | 95.84 |
| Bra026115.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 95.45 | 95.33 |
| Bra016653.1-P | Field mustard | plasma membrane | 95.19 | 95.32 |
| VIT_09s0002g07920.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 45.84 | 94.13 |
| VIT_09s0002g07940.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 48.05 | 93.67 |
| PGSC0003DMT400073438 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 34.94 | 93.4 |
| CDY53310 | Canola | plasma membrane | 95.71 | 91.9 |
| PGSC0003DMT400036847 | Potato | plasma membrane | 90.13 | 90.48 |
| Solyc03g117480.2.1 | Tomato | nucleus, unclear | 89.61 | 89.96 |
| KRH44486 | Soybean | endoplasmic reticulum | 89.61 | 89.84 |
| KRH47417 | Soybean | nucleus | 89.61 | 89.84 |
| VIT_09s0002g07880.t01 | Wine grape | extracellular | 89.09 | 89.44 |
| Solyc06g068240.2.1 | Tomato | plastid | 88.7 | 89.05 |
| KRH61103 | Soybean | endoplasmic reticulum, plasma membrane | 12.99 | 87.72 |
| VIT_11s0118g00350.t01 | Wine grape | plasma membrane | 86.62 | 87.3 |
| VIT_09s0002g08010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 28.7 | 85.33 |
| CDX81728 | Canola | plasma membrane | 95.97 | 62.95 |
| Zm00001d041187_P002 | Maize | cytosol, endoplasmic reticulum, golgi | 10.78 | 51.88 |
| AT1G78920.2 | Thale cress | plasma membrane | 35.71 | 34.29 |
| AT1G16780.1 | Thale cress | golgi, mitochondrion, plasma membrane | 35.71 | 34.29 |
Protein Annotations
| KEGG:00190+3.6.1.1 | MapMan:24.1.4.1 | EntrezGene:838138 | UniProt:A0A178WA14 | ProteinID:AAF82139.1 | ProteinID:AEE29349.1 |
| EMBL:AK221989 | ArrayExpress:AT1G15690 | EnsemblPlantsGene:AT1G15690 | RefSeq:AT1G15690 | TAIR:AT1G15690 | RefSeq:AT1G15690-TAIR-G |
| EnsemblPlants:AT1G15690.1 | TAIR:AT1G15690.1 | Symbol:AVP1 | EMBL:AY065016 | EMBL:AY078953 | Unigene:At.21942 |
| ProteinID:BAA32210.1 | EMBL:BT002481 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009414 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009678 | GO:GO:0009705 |
| GO:GO:0009926 | GO:GO:0009941 | GO:GO:0010008 | GO:GO:0010248 | GO:GO:0015992 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0046872 | GO:GO:0048366 | GO:GO:0055085 | GO:GO:1902600 |
| EMBL:M81892 | HAMAP:MF_01129 | RefSeq:NP_173021.1 | ProteinID:OAP14365.1 | UniProt:P31414 | PFAM:PF03030 |
| PIRSF:PIRSF001265 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0009062 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020144 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF10 |
| TIGRFAMs:TIGR01104 | TMHMM:TMhelix | UniParc:UPI000000BD83 | EMBL:Z17694 | EMBL:Z17695 | SEG:seg |
Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
Coordinates
chr1:+:5398926..5402519
Molecular Weight (calculated)
80824.5 Da
IEP (calculated)
4.891
GRAVY (calculated)
0.615
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.