Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- golgi 3
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G78920.2 | Thale cress | plasma membrane | 92.64 | 92.64 |
| VIT_09s0054g00700.t01 | Wine grape | plasma membrane | 88.53 | 88.75 |
| KRH46977 | Soybean | endoplasmic reticulum | 86.78 | 86.89 |
| KRH44688 | Soybean | plasma membrane | 86.66 | 86.77 |
| Os02t0537900-01 | Rice | plasma membrane | 86.03 | 86.36 |
| Zm00001d030996_P011 | Maize | plasma membrane | 86.03 | 86.36 |
| EES17335 | Sorghum | plasma membrane | 85.91 | 86.23 |
| Solyc04g071880.2.1 | Tomato | nucleus, plastid | 85.79 | 86.0 |
| PGSC0003DMT400064558 | Potato | plasma membrane | 81.92 | 85.55 |
| TraesCS6B01G376400.1 | Wheat | golgi | 85.16 | 85.48 |
| TraesCSU01G080600.1 | Wheat | plasma membrane | 85.04 | 85.36 |
| HORVU6Hr1G083160.1 | Barley | plasma membrane | 84.91 | 85.23 |
| TraesCS6D01G326300.1 | Wheat | plasma membrane | 84.91 | 85.23 |
| Zm00001d041420_P003 | Maize | plasma membrane | 85.54 | 85.01 |
| GSMUA_Achr5P13160_001 | Banana | plasma membrane | 84.41 | 81.76 |
| GSMUA_Achr1P01170_001 | Banana | cytosol, plasma membrane, vacuole | 26.43 | 70.67 |
| AT1G15690.1 | Thale cress | plasma membrane | 34.29 | 35.71 |
Protein Annotations
| KEGG:00190+3.6.1.1 | MapMan:24.1.4.2 | EntrezGene:838249 | UniProt:A0A178WMW7 | ProteinID:AAG09080.1 | ProteinID:AEE29496.2 |
| ProteinID:ANM60769.1 | ProteinID:ANM60770.1 | ArrayExpress:AT1G16780 | EnsemblPlantsGene:AT1G16780 | RefSeq:AT1G16780 | TAIR:AT1G16780 |
| RefSeq:AT1G16780-TAIR-G | EnsemblPlants:AT1G16780.1 | TAIR:AT1G16780.1 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004427 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0009678 |
| GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0046872 | GO:GO:0055085 |
| GO:GO:1902600 | HAMAP:MF_01129 | RefSeq:NP_001319021.1 | RefSeq:NP_001323031.1 | RefSeq:NP_001323032.1 | ProteinID:OAP19640.1 |
| PFAM:PF03030 | PIRSF:PIRSF001265 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:PPase-energised_H-pump | PANTHER:PTHR31998 | PANTHER:PTHR31998:SF11 | UniProt:Q9FWR2 |
| TIGRFAMs:TIGR01104 | TMHMM:TMhelix | UniParc:UPI000004826E | Symbol:VHP2;2 | SEG:seg | : |
Description
AVPL2Pyrophosphate-energized membrane proton pump 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWR2]
Coordinates
chr1:-:5739468..5744237
Molecular Weight (calculated)
85354.0 Da
IEP (calculated)
5.420
GRAVY (calculated)
0.595
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMDEDVEQA TLVSYSDKPR TFPDMRSKTY SPLIIRILRN LNVRALSVLL LLSFGGIFYM GARTSPIIVF VFVVCIISFM LSVYLTKWVL AKDEGPPEMV
101: QISDAIRDGA EGFLRTQYGT ISKMAFLLAF VILCIYLFRN LTPQQEASGL GRTMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLDVDSPGS MKVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEHGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAQKC KIEDPSGFIL FPLVVHSFDL VISSIGILSI KGTRNASVKS PVEDPMVVLQ KGYSLTIILA
401: VLTFGASTRW LLYTEQAPSA WLNFFMCGLV GIITAYVFVW ISRYYTDYKY EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLVISVAI ISAFWLGNTS
501: GLIDEKGNPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DVLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFIGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIMD YKEKPDYGRC VAIVASSALR EMIKPGALAI ISPIAVGFVF
701: RILGYYTGQP LLGAKVVAAM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSD SHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPI
801: FL
101: QISDAIRDGA EGFLRTQYGT ISKMAFLLAF VILCIYLFRN LTPQQEASGL GRTMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLDVDSPGS MKVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEHGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAQKC KIEDPSGFIL FPLVVHSFDL VISSIGILSI KGTRNASVKS PVEDPMVVLQ KGYSLTIILA
401: VLTFGASTRW LLYTEQAPSA WLNFFMCGLV GIITAYVFVW ISRYYTDYKY EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLVISVAI ISAFWLGNTS
501: GLIDEKGNPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DVLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFIGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIMD YKEKPDYGRC VAIVASSALR EMIKPGALAI ISPIAVGFVF
701: RILGYYTGQP LLGAKVVAAM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSD SHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPI
801: FL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.