CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

cytosol 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
BaCelLo:	cytosol
MultiLoc:	golgi
PProwler:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70021	Canola	golgi, plasma membrane	97.2	99.59
GSMUA_Achr1P01170_001	Banana	cytosol, plasma membrane, vacuole	62.0	51.67
Bra008386.1-P	Field mustard	plasma membrane	100.0	31.13
AT1G78920.2	Thale cress	plasma membrane	99.2	30.92
CDX87422	Canola	plasma membrane	99.2	30.92
CDX88491	Canola	plasma membrane	99.2	30.92
CDX88482	Canola	endoplasmic reticulum	9.6	30.0
VIT_09s0054g00700.t01	Wine grape	plasma membrane	94.0	29.38
KRH46977	Soybean	endoplasmic reticulum	93.6	29.21
KRH44688	Soybean	plasma membrane	92.8	28.96
TraesCS6D01G326300.1	Wheat	plasma membrane	91.2	28.54
HORVU6Hr1G083160.1	Barley	plasma membrane	91.2	28.54
TraesCS6B01G376400.1	Wheat	golgi	91.2	28.54
TraesCSU01G080600.1	Wheat	plasma membrane	91.2	28.54
Solyc04g071880.2.1	Tomato	nucleus, plastid	91.2	28.5
Zm00001d030996_P011	Maize	plasma membrane	90.8	28.41
EES17335	Sorghum	plasma membrane	90.8	28.41
Os02t0537900-01	Rice	plasma membrane	90.4	28.29
Zm00001d041420_P003	Maize	plasma membrane	90.4	28.0
GSMUA_Achr5P13160_001	Banana	plasma membrane	91.2	27.54
PGSC0003DMT400064558	Potato	plasma membrane	79.2	25.78
CDY39975	Canola	plasma membrane	48.0	15.6
CDX96835	Canola	plasma membrane	47.6	15.47
CDX87313	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.6	15.47
CDX83972	Canola	plasma membrane	47.6	15.47
CDY36581	Canola	plasma membrane	47.6	15.43
CDY33390	Canola	plasma membrane	47.6	15.43
CDY53310	Canola	plasma membrane	47.6	14.84
CDY61273	Canola	plastid	25.2	10.4
CDX81728	Canola	plasma membrane	47.6	10.14
CDY53311	Canola	plastid	11.6	8.33
CDY69601	Canola	plasma membrane	0.0	0.0
CDY69568	Canola	plasma membrane	0.0	0.0

Protein Annotations

KEGG:00190+3.6.1.1	MapMan:35.1	GO:A0A078JRQ4	UniProt:A0A078JRQ4	EnsemblPlants:CDY70253	ProteinID:CDY70253
ProteinID:CDY70253.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0009678	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00097621001	PFAM:PF03030	InterPro:PPase-energised_H-pump
PANTHER:PTHR31998	PANTHER:PTHR31998:SF11	TMHMM:TMhelix	UniParc:UPI0004EDCE8B	SEG:seg	:

Description

BnaAnng33120DBnaAnng33120D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JRQ4]

Coordinates

chrLK041597:-:2054..3400

Molecular Weight (calculated)

26350.5 Da

IEP (calculated)

6.525

GRAVY (calculated)

0.581

Length

250 amino acids

Sequence
(BLAST)

001: PESVREITDL LDAVGNTTKA TTKGFAIGSA ALASFLLFSA YMDEVSAFAS VSFKEVDIAI PEVFVGGLLG SMLIFLFSAW ACAAVGRTAQ EVVNEVRRQF
101: IERPGIMEYK EKPDYSRCVA IVASAALREM IKPGALAIAS PIVVGLVFRI LGYYTGQPLL GAKVVASMLM FATVCGILMA LFLNTAGGAW DNAKKYIETG
201: ALGGKGSEAH KAAVTGDTVG DPFKDTAGPS IHVLIKMLAT ITLVMAPVFL

Best Arabidopsis Sequence Match ( AT1G78920.1 )
(BLAST)

001: MMMDEDVEQA SLMSFNDRPR AFPNMRSKTY SPLIFRIIRK LNVRVLSIIL LFCFGAIFYM GASTSPIIVF VFTVCIISFL LSIYLTKWVL AKDEGPPEMV
101: EISDAIRDGA EGFFRTQYST ISKMAILLAF VILCIYLFRS LTPQQEAAGL GRAMSAYITV AAFLLGALCS GIAGYVGMWV SVRANVRVSS AARRSAREAL
201: QIAVRAGGFS ALVVVGMAVI GIAILYSTFY VWLGVGSPGS MNVTDLPLLL VGYGFGASFV ALFAQLGGGI YTKGADVGAD LVGKVEQGIP EDDPRNPAVI
301: ADLVGDNVGD CAARGADLFE SIAAEIISAM ILGGTMAKKC KIEDPSGFIL FPLVVHSFDL IISSIGILSI KGTRDASVKS PVEDPMAVLQ KGYSLTIILA
401: VITFGASTRW LLYTEQAPSA WFNFALCGLV GIITAYIFVW ISKYYTDYKH EPVRTLALAS STGHGTNIIA GVSLGLESTA LPVLTISVAI ISAYWLGNTS
501: GLVDENGIPT GGLFGTAVAT MGMLSTAAYV LTMDMFGPIA DNAGGIVEMS QQPESVREIT DLLDAVGNTT KATTKGFAIG SAALASFLLF SAYMDEVSAF
601: ANVSFKEVDI AIPEVFVGGL LGAMLIFLFS AWACAAVGRT AQEVVNEVRR QFIERPGIME YKEKPDYSRC VAIVASAALR EMIKPGALAI ASPIVVGLVF
701: RILGYYTGQP LLGAKVVASM LMFATVCGIL MALFLNTAGG AWDNAKKYIE TGALGGKGSE AHKAAVTGDT VGDPFKDTAG PSIHVLIKML ATITLVMAPV
801: FL

Arabidopsis Description

AVPL1Pyrophosphate-energized membrane proton pump 2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZN6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.