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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • vacuole 7
  • extracellular 4
  • endoplasmic reticulum 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
plasma membrane: 18260611
vacuole: 18557835
plasma membrane: 19502382
plastid: 21433289
nucleus: 26035336
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 26035336 doi
M Li, X Yin, K Sakata, P Yang, S Komatsu
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G031480.1 Barley cytosol, nucleus 9.45 93.51
Os02t0184200-01 Rice plasma membrane 38.32 92.99
Os06t0178900-01 Rice plasma membrane 91.73 91.13
EES07699 Sorghum plasma membrane 90.03 90.38
Os06t0644200-01 Rice plasma membrane 86.88 84.65
HORVU7Hr1G031470.3 Barley golgi, plasma membrane 9.06 82.14
Os01t0337500-00 Rice plasma membrane 76.25 75.16
Os05t0156900-01 Rice plasma membrane 73.75 72.99
GSMUA_Achr8P06430_001 Banana extracellular 10.11 69.37
GSMUA_Achr8P06440_001 Banana extracellular, golgi, vacuole 18.9 54.96
GSMUA_Achr8P06420_001 Banana extracellular 4.99 52.05
Zm00001d043644_P001 Maize endoplasmic reticulum, extracellular, plastid 5.51 46.15
Zm00001d043643_P001 Maize endoplasmic reticulum, extracellular, plastid 5.51 46.15
Zm00001d043641_P001 Maize endoplasmic reticulum, extracellular, plastid 5.51 46.15
Os02t0537900-01 Rice plasma membrane 37.14 35.42
Bra026752.1-P Field mustard plastid 7.87 17.24
CDY53311 Canola plastid 7.74 16.95
Protein Annotations
KEGG:00190+3.6.1.1MapMan:24.1.4.1EntrezGene:4331044ProteinID:BAD02276.1ProteinID:BAD36028.1ProteinID:BAD36736.1
ProteinID:BAF10336.1ProteinID:BAS81426.1GO:GO:0003674GO:GO:0003824GO:GO:0004427GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009678GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0055085GO:GO:1902600HAMAP:MF_01129EnsemblPlantsGene:Os02g0802500EnsemblPlants:Os02t0802500-01
PFAM:PF03030PIRSF:PIRSF001265InterPro:PPase-energised_H-pumpPANTHER:PTHR31998PANTHER:PTHR31998:SF19UniProt:Q75U53
TIGRFAMs:TIGR01104TMHMM:TMhelixUniParc:UPI000021FCD1RefSeq:XP_015626907.1SEG:seg:
Description
Similar to H(+)-translocating (Pyrophosphate-ENERGIZED) inorganic pyrophosphatase beta-1 polypeptide (EC 3.6.1.1) (Fragment). (Os02t0802500-01);Similar to Proton translocating pyrophosphatase. (Os02t0802500-02)
Coordinates
chr2:-:34210440..34214885
Molecular Weight (calculated)
79855.5 Da
IEP (calculated)
5.244
GRAVY (calculated)
0.566
Length
762 amino acids
Sequence
(BLAST)
001: MAILSDVATE VLIPIAAIIG IGFSIAQWVL VARVKLAPSQ PGASRSKDGY GDSLIEEEEG LNDHNVVAKC AEIQNAIAEG ATSFLFTEYQ YVGVFMSIFA
101: VVIFLFLGSV EGFSTKTHPC TYSKDKECKP ALFNALFSTV SFLLGAITSV VSGFLGMKIA TYANARTTLE ARKGVGKAFI TAFRSGAVMG FLLASNGLLV
201: LYIAINLFKM YYGDDWEGLF ESITGYGLGG SSMALFGRVG GGIYTKAADV GADLVGKVER NIPEDDPRNP AVIADNVGDN VGDIAGMGSD LFGSYAESSC
301: AALVVASISS FGINHDFTGM CYPLLVSSMG IIVCLITTLF ATDFFEIKAV KEIEPSLKKQ LIISTALMTV GIALVSWLAL PYKFTIFNFG EQKEVTNWGL
401: FLCVSIGLWA GLIIGYVTEY YTSNAYSPVQ DVADACRTGA ATNVIFGLAL GYKSVIIPIF AIALGIYVSF TIAAMYGIAV AALGMLSTIA TGLSIDAYGP
501: ISDNAGGIAE MAGMSHRIRE RTDALDAAGN TTAAIGKGFA IGSAALVSLA LFGAFVSRAG VKVVDVLSPK VIIGLIVGAM LPYWFSAMTM KSVGSAALKM
601: VEEVRRQFNT IPGLMEGTGK PDYANCVKIS TDASIKQMIP PGALVMLTPL IVGTLFGVQT LSGVLAGALV SGVQVAISAS NTGGAWDNAK KYIEAGASEH
701: ARSLGPKGSD CHKAAVIGDT IGDPLKDTSG PSLNILIKLM AVESLVFAPF FATHGGILFK LF
Best Arabidopsis Sequence Match ( AT1G15690.1 )
(BLAST)
001: MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNGKNGYGD YLIEEEEGVN DQSVVAKCAE IQTAISEGAT SFLFTEYKYV
101: GVFMIFFAAV IFVFLGSVEG FSTDNKPCTY DTTRTCKPAL ATAAFSTIAF VLGAVTSVLS GFLGMKIATY ANARTTLEAR KGVGKAFIVA FRSGAVMGFL
201: LAASGLLVLY ITINVFKIYY GDDWEGLFEA ITGYGLGGSS MALFGRVGGG IYTKAADVGA DLVGKIERNI PEDDPRNPAV IADNVGDNVG DIAGMGSDLF
301: GSYAEASCAA LVVASISSFG INHDFTAMCY PLLISSMGIL VCLITTLFAT DFFEIKLVKE IEPALKNQLI ISTVIMTVGI AIVSWVGLPT SFTIFNFGTQ
401: KVVKNWQLFL CVCVGLWAGL IIGFVTEYYT SNAYSPVQDV ADSCRTGAAT NVIFGLALGY KSVIIPIFAI AISIFVSFSF AAMYGVAVAA LGMLSTIATG
501: LAIDAYGPIS DNAGGIAEMA GMSHRIRERT DALDAAGNTT AAIGKGFAIG SAALVSLALF GAFVSRAGIH TVDVLTPKVI IGLLVGAMLP YWFSAMTMKS
601: VGSAALKMVE EVRRQFNTIP GLMEGTAKPD YATCVKISTD ASIKEMIPPG CLVMLTPLIV GFFFGVETLS GVLAGSLVSG VQIAISASNT GGAWDNAKKY
701: IEAGVSEHAK SLGPKGSEPH KAAVIGDTIG DPLKDTSGPS LNILIKLMAV ESLVFAPFFA THGGILFKYF
Arabidopsis Description
AVP1VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.