Factsheet for Bra026752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53311	Canola	plastid	98.85	98.85
GSMUA_Achr8P06440_001	Banana	extracellular, golgi, vacuole	11.49	15.27
Zm00001d043644_P001	Maize	endoplasmic reticulum, extracellular, plastid	2.87	10.99
Zm00001d043643_P001	Maize	endoplasmic reticulum, extracellular, plastid	2.87	10.99
Zm00001d043641_P001	Maize	endoplasmic reticulum, extracellular, plastid	2.87	10.99
GSMUA_Achr8P06420_001	Banana	extracellular	2.01	9.59
HORVU7Hr1G031480.1	Barley	cytosol, nucleus	2.01	9.09
Os02t0802500-01	Rice	plasma membrane	17.24	7.87
Bra035179.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	17.24	7.8
EES07699	Sorghum	plasma membrane	16.95	7.77
Bra026115.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	16.95	7.65
Bra016653.1-P	Field mustard	plasma membrane	16.67	7.54
Bra018135.1-P	Field mustard	plastid	16.09	7.31
Bra035076.1-P	Field mustard	plasma membrane	13.51	5.86
Bra008386.1-P	Field mustard	plasma membrane	13.22	5.73
GSMUA_Achr8P06430_001	Banana	extracellular	0.86	2.7
HORVU7Hr1G031470.3	Barley	golgi, plasma membrane	0.0	0.0

Protein Annotations

KEGG:00400+1.3.1.12	KEGG:00400+1.3.1.78	KEGG:00401+1.3.1.12	Gene3D:3.40.50.720	MapMan:4.1.5.2.3	InterPro:6-PGluconate_DH-like_C_sf
InterPro:Arogenate_DH_2	EnsemblPlantsGene:Bra026752	EnsemblPlants:Bra026752.1	EnsemblPlants:Bra026752.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004665	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006571	GO:GO:0008150	GO:GO:0008152	GO:GO:0008977	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0055114	InterPro:IPR003099	UniProt:M4ED92	InterPro:NAD(P)-bd_dom_sf
PFAM:PF02153	PIRSF:PIRSF036577	PFscan:PS51176	PANTHER:PTHR43207	PANTHER:PTHR43207:SF2	InterPro:Prephen_DH
SUPFAM:SSF48179	SUPFAM:SSF51735	UniParc:UPI0002542CB6	SEG:seg	:	:

Description

AT1G15710 (E=1e-169) | prephenate dehydrogenase family protein

Coordinates

chrA09:-:33529573..33530619

Molecular Weight (calculated)

39673.3 Da

IEP (calculated)

8.157

GRAVY (calculated)

-0.408

Length

348 amino acids

Sequence
(BLAST)

001: MLLHFSPTKP LFSPPNLRRN PTVSPPRSLR IRAIDAAQIF DYETQLKSEY RKSSALKIAV LGFGNFGQFL SKTLVRHGHD LITHSRSDYS SAASSIGARF
101: FHNPHDLCEQ HPDVVLLCTS ILSTESVLRS FPFQRLRRST LFVDVLSVKE FPKTLFLKYL PKEFDILCTH PMFGPESGKH SWSGLPFVYD KVRIGDESSR
201: HERCDKFLKV FESEGCRMVE MSCEEHDKHA AGSQFVTHTM GRVLEKFGVE SSPINTKGYE TLLDLVENTS SDSFELYYGL FMYNQNALEQ LERLDMAFES
301: IKKELFGRLH QVYRKQMFGG GEGKKTEQKL LNDGVVRVKE ESSSSSSS

Best Arabidopsis Sequence Match ( AT1G15710.1 )
(BLAST)

001: MLLHFSPAKP LISPPNLRRN SPTFLISPPR SLRIRAIDAA QIFDYETQLK SEYRKSSALK IAVLGFGNFG QFLSKTLIRH GHDLITHSRS DYSDAANSIG
101: ARFFDNPHDL CEQHPDVVLL CTSILSTESV LRSFPFQRLR RSTLFVDVLS VKEFPKALFI KYLPKEFDIL CTHPMFGPES GKHSWSGLPF VYDKVRIGDA
201: ASRQERCEKF LRIFENEGCK MVEMSCEKHD YYAAGSQFVT HTMGRVLEKY GVESSPINTK GYETLLDLVE NTSSDSFELF YGLFMYNPNA LEQLERLDMA
301: FESVKKELFG RLHQQYRKQM FGGEVQSPKK TEQKLLNDGG VVPMNDISSS SSSSSSSS

Arabidopsis Description

TYRAAT2Arogenate dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LMR3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.