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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • mitochondrion 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, peroxisome
Any Predictor:cytosol, extracellular, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:extracellular
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G118600.1 Wheat plastid 36.38 71.96
Os02t0270800-00 Rice cytosol 47.76 65.31
TraesCS7A01G118500.1 Wheat cytosol, extracellular, plastid 46.64 64.43
TraesCS7A01G118400.1 Wheat cytosol 46.83 62.91
TraesCS7D01G114000.1 Wheat cytosol 61.94 56.95
TraesCS7D01G113700.1 Wheat cytosol 62.5 51.46
Os02t0271600-00 Rice cytosol, peroxisome, plastid 63.81 50.82
Os02t0269600-00 Rice cytosol 62.5 50.45
TraesCS3D01G138900.1 Wheat extracellular 61.94 48.75
TraesCS7D01G113900.1 Wheat plasma membrane 66.23 48.63
TraesCS7B01G015100.1 Wheat extracellular, plasma membrane, vacuole 66.6 48.44
TraesCS7A01G118300.1 Wheat extracellular, plasma membrane, vacuole 66.42 48.17
Os02t0271000-01 Rice extracellular 66.23 48.1
TraesCS7B01G015200.1 Wheat extracellular, plasma membrane, vacuole 66.23 47.97
TraesCS7D01G113800.1 Wheat extracellular, plasma membrane, vacuole 65.86 47.9
TraesCS7A01G118100.1 Wheat extracellular 65.67 47.76
TraesCS6A01G112200.1 Wheat extracellular, plasma membrane 65.67 47.7
HORVU7Hr1G024950.4 Barley extracellular, plastid, vacuole 66.79 47.48
TraesCS7A01G118200.1 Wheat extracellular 60.07 47.21
TraesCS7B01G015300.1 Wheat extracellular, plasma membrane, vacuole 64.18 47.19
TraesCS6D01G101200.1 Wheat extracellular, plasma membrane 65.3 47.11
TraesCS5B01G367400.1 Wheat extracellular, vacuole 65.11 47.1
HORVU7Hr1G024930.4 Barley extracellular 64.93 46.84
TraesCS5B01G368100.1 Wheat extracellular, plasma membrane, vacuole 64.37 46.68
TraesCS5A01G347300.1 Wheat extracellular 62.5 46.66
TraesCS3A01G138300.1 Wheat vacuole 63.62 46.08
HORVU7Hr1G024940.8 Barley mitochondrion 66.04 45.8
HORVU6Hr1G092540.10 Barley extracellular, mitochondrion, vacuole 63.62 45.71
HORVU6Hr1G035280.1 Barley extracellular, vacuole 62.69 45.53
HORVU6Hr1G020120.9 Barley extracellular, mitochondrion, plasma membrane 65.67 45.3
TraesCS6D01G162400.1 Wheat extracellular, plasma membrane 61.38 44.76
TraesCS3A01G138200.1 Wheat vacuole 59.33 44.54
TraesCS3B01G155900.1 Wheat extracellular 62.69 44.33
TraesCS3A01G138400.1 Wheat extracellular, plasma membrane, plastid 63.06 44.13
TraesCS6B01G201000.1 Wheat cytosol 62.5 43.79
TraesCS6A01G173300.1 Wheat cytosol, plasma membrane, plastid 61.57 43.59
KXG28778 Sorghum extracellular, plasma membrane 58.58 42.9
HORVU3Hr1G026330.16 Barley extracellular, plasma membrane 63.62 42.36
EES10000 Sorghum extracellular, vacuole 58.96 42.19
GSMUA_Achr3P11530_001 Banana nucleus 55.6 42.15
HORVU3Hr1G026270.1 Barley plasma membrane, vacuole 62.31 41.91
GSMUA_Achr3P11520_001 Banana cytosol 54.85 41.76
Os02t0270900-00 Rice extracellular, plasma membrane 48.51 41.47
TraesCS7D01G113600.1 Wheat extracellular 45.15 41.09
GSMUA_AchrUn_... Banana cytosol 55.22 40.77
TraesCS3B01G156100.1 Wheat vacuole 42.16 40.21
GSMUA_AchrUn_... Banana cytosol 50.19 40.09
TraesCS3B01G156000.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.16 38.7
GSMUA_Achr3P11460_001 Banana plastid 49.63 38.05
EES01595 Sorghum plasma membrane 52.05 37.8
EES11771 Sorghum plastid 51.49 35.25
TraesCS3A01G138600.1 Wheat extracellular 31.9 34.2
Os02t0270200-01 Rice extracellular, plasma membrane 30.97 33.47
EER97086 Sorghum extracellular 47.01 32.94
GSMUA_Achr3P11540_001 Banana extracellular, vacuole 33.96 31.99
GSMUA_AchrUn_... Banana extracellular, vacuole 30.41 31.65
GSMUA_Achr3P11470_001 Banana cytosol 28.92 30.88
TraesCS6A01G134300.1 Wheat vacuole 24.25 30.73
TraesCS3B01G156200.1 Wheat vacuole 22.01 30.1
GSMUA_Achr3P11560_001 Banana plastid 49.25 29.73
GSMUA_Achr3P11480_001 Banana plastid 34.89 28.21
KXG40137 Sorghum extracellular 41.04 27.47
TraesCS7A01G118700.1 Wheat extracellular 15.49 26.02
EES02777 Sorghum extracellular, vacuole 37.87 25.7
KXG20396 Sorghum endoplasmic reticulum, extracellular 36.75 25.58
EER98388 Sorghum extracellular, plasma membrane 38.99 25.3
OQU88639 Sorghum endoplasmic reticulum, extracellular 33.96 24.69
EER98135 Sorghum extracellular 33.77 24.33
KXG34604 Sorghum extracellular, vacuole 33.96 24.3
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1UniProt:A0A194YP63GO:GO:0003674
GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538InterPro:IPR036852EnsemblPlants:KXG30014ProteinID:KXG30014ProteinID:KXG30014.2PFAM:PF00082
ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF377InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-AS
EnsemblPlantsGene:SORBI_3004G123801SUPFAM:SSF52743UniParc:UPI000B8BAC78SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:14003392..14010202
Molecular Weight (calculated)
56538.4 Da
IEP (calculated)
5.631
GRAVY (calculated)
0.171
Length
536 amino acids
Sequence
(BLAST)
001: MGEKKHDDHR SMVTASHHDV LASVLGSGLA AGVARGGAPR ARLAVYKACW GATVWCGGAA LLAAIDDATN DGVDVLSLSL GGFQEFAGTL HAVARGVPVV
101: FAGMNRGPAP QTVRNTAPWL ITVAASMIDR SFPTKVVLGN NEELVGQSRY VDAMTNTSEF INLVPGFRCD NASLASVNAT GKVVLCYAPE DVNINPPRQG
201: FLNAISNVKE VGARGLIFAG YSSNVLDRAD NCNGIMPCVL VDFEIANRIA FYMINTRTPV VRISPATTVV GDWVLSPRIA SFSSRGPSVE YPAILKPDIA
301: APGVSILAAV RDSYDFMSGT SMACPHVSAV VALLKSVHPD WSPAMIKSAI VTTASTTDRF GMPIVAEGLP RKPADPFDMG GGHIDPDRAA DPGLVYDVDP
401: AEYTRFFRCT LDAKDDCSSY MGRLYQLNLP SIAVPNLAGS VTVSRTVTNV GPAEATYRVA VEAPAGVDVS VDPAVMTFAV DGSRNATFVV TFTARQMVEG
501: VYTFGSLAWS DDGGGHSVRI PIAVRSVIQD YVADVS
Best Arabidopsis Sequence Match ( AT4G10510.1 )
(BLAST)
001: MGRAVSCREP VLRARYSTII YVHIVYLGEK QHDDPEFVTE SHHRMLWSLL GSKEEAHGSM VHSFRHGFSG FAAKLTESQA KKIADLPEVV HVIPDRFYKP
101: ATTRTWDYLG LSPTNPKNLL NQTNMGEQMI IGIIDSGVWP ESEVFNDNEI GPVPSHWKGG CESGEDFNSS HCNKKLIGAK YFINAFLATH ESFNSSESLD
201: FISPRGYNGH GTHVATIAGG SYVPNTSYKG LAGGTVRGGA PRARIAVYKT CWYLDLDIAA CSSADILKAM DEAIHDGVDV LSLSLGFEPL YPETDVRDGI
301: ATGAFHAVLK GITVVCAAGN AGPAAQTVGN TAPWILTVAA TTLDRSFVTP MTLGNNKVIL GQAIYTGTEV GFTSLVYPEN PGNSNESFSG TCERLLINSN
401: RTMAGKVVLC FTESPYSISV TRAAHYVKRA GGLGVIIAGQ PGNVLRPCLD DFPCVAVDYE LGTYILFYIR SNGSPVVKIQ PSRTLIGQPV GTKVASFSSR
501: GPNPISAAIL KPDIAAPGVS ILAATTTNTT FNDRGFIFLS GTSMATPTIS GIVALLKALH PDWSPAAIRS AIVTTAWRTD PFGEQIFAEG SPRKPADPFD
601: YGGGLVNPEK ATKPGLVYDL GLEDYVLYMC SVGYNETSIS QLVGKGTVCS YPKPSVLDFN LPSITIPNLK EEVTLPRTLT NVGPLESVYR VAVEPPLGTQ
701: VTVTPETLVF NSTTKRVSFK VSVSTTHKIN TGYYFGSLTW SDSLHNVTIP LSVRTQLLPY YYDEN
Arabidopsis Description
SBT3.7Subtilisin-like protease SBT3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.