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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:
  • endoplasmic reticulum 6
  • plasma membrane 5
  • vacuole 5
  • golgi 5
  • extracellular 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036788_P003 Maize vacuole 87.27 87.61
Os06t0624100-00 Rice cytosol 79.74 82.86
PGSC0003DMT400024344 Potato cytosol 59.74 63.36
GSMUA_Achr1P27960_001 Banana extracellular, plasma membrane 62.6 63.17
VIT_04s0044g01970.t01 Wine grape extracellular, plasma membrane 61.82 62.39
Solyc02g068280.2.1 Tomato nucleus 61.04 62.09
KRH07873 Soybean nucleus 60.65 61.29
KRH39376 Soybean extracellular, plasma membrane 60.0 60.55
KRH28969 Soybean extracellular, plasma membrane 58.96 59.58
KRH76486 Soybean nucleus 58.96 59.5
EER97086 Sorghum extracellular 41.17 41.44
KXG28778 Sorghum extracellular, plasma membrane 38.18 40.16
EES10000 Sorghum extracellular, vacuole 38.44 39.52
EES01595 Sorghum plasma membrane 36.75 38.35
OQU88639 Sorghum endoplasmic reticulum, extracellular 36.23 37.86
EES02777 Sorghum extracellular, vacuole 38.57 37.59
KXG30014 Sorghum cytosol, extracellular, peroxisome 25.58 36.75
EES11771 Sorghum plastid 37.27 36.65
EER98388 Sorghum extracellular, plasma membrane 39.22 36.56
KXG34604 Sorghum extracellular, vacuole 35.06 36.05
KXG40137 Sorghum extracellular 37.27 35.83
EER98135 Sorghum extracellular 34.55 35.75
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1UniProt:A0A194YLC2
GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0016787GO:GO:0019538InterPro:IPR036852InterPro:IPR037045EnsemblPlants:KXG20396ProteinID:KXG20396
ProteinID:KXG20396.1InterPro:PA_domainPFAM:PF00082PFAM:PF02225PFAM:PF05922PRINTS:PR00723
ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF382InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-AS
InterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfEnsemblPlantsGene:SORBI_3010G196200SUPFAM:SSF52743
SignalP:SignalP-noTMUniParc:UPI0007F2F159SEG:seg:::
Description
hypothetical protein
Coordinates
chr10:+:53939846..53944067
Molecular Weight (calculated)
82582.1 Da
IEP (calculated)
8.645
GRAVY (calculated)
-0.156
Length
770 amino acids
Sequence
(BLAST)
001: MASSPGRAMF FLTLSLVLLG DLRCCSCSQV YVVYMGKGPQ QGESDRQHDD ILRLHHQMLT AVHDGSSEKA QASHVYTYSS GFQGFAAKLN KRQAMELAEM
101: PGVVSVFPNT KRRLCTTHSW DFMGLSTNAE GEVPGLSTNN QENIIVGFID TGIWPESPSF SDHGMPPVPK RWRGQCQSGE ANSPSNFTCN RKIIGGRYYL
201: NGYQTEESGS SKNAIKFISP RDSSGHGSHT ASIAAGRFVR NMNYGGLGTG GGRGGAPMAR IAAYKACWDS GCYDVDILAA FDDAIRDGVD IISVSLGPDY
301: PQGDYLSDAI SIGSFHATIN GILVVSSAGN AGRQGSATNL APWMLTVAAG TTDRSFSSYI RLANGSFLMG ESLSTYHMKT SVRTISASEV NAGYFTPYQS
401: SLCLDSSLNS TKAKGKILIC RRNEGSSESR LSTSMIVKEA GAVGMILIDE MEDHVANHFA VPGVTVGKTM GDKIISYVKS TRHASTMILP AKTILGLRDA
501: PRVAAFSSRG PSSLTPEILK PDVAAPGLNI LAAWSPAKND MHFNILSGTS MACPHVTGIA ALVKSVYPSW SPSAIKSAIV TTATVLNSKR KTIARDPNGR
601: IAATPFDFGS GFVDPIKALN PGIIFDAQPE DYKSFLCATT HDDHSLHLIT GDNSSCTHRA SSSATALNYP SITIPYLKQS YSVMRTMTNV GNPRSTYHAV
701: VSAPRGISVR VTPEVINFEN YGEKRTFTVS LHVDVPPRGY VFGSLSWHGN GTEARLMMPL VVKVQTSDKA
Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)
001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL
Arabidopsis Description
AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [vacuole,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.