Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- plasma membrane 5
- vacuole 6
- golgi 5
- extracellular 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024344 | Potato | cytosol | 92.21 | 96.14 |
| VIT_04s0044g01970.t01 | Wine grape | extracellular, plasma membrane | 74.11 | 73.53 |
| KRH07873 | Soybean | nucleus | 71.2 | 70.73 |
| KRH28969 | Soybean | extracellular, plasma membrane | 71.2 | 70.73 |
| KRH76486 | Soybean | nucleus | 71.07 | 70.51 |
| KRH39376 | Soybean | extracellular, plasma membrane | 70.15 | 69.59 |
| GSMUA_Achr1P27960_001 | Banana | extracellular, plasma membrane | 64.86 | 64.35 |
| Os06t0624100-00 | Rice | cytosol | 61.29 | 62.62 |
| KXG20396 | Sorghum | endoplasmic reticulum, extracellular | 62.09 | 61.04 |
| Zm00001d036788_P003 | Maize | vacuole | 60.5 | 59.71 |
| Solyc01g096560.1.1 | Tomato | cytosol | 40.29 | 41.44 |
| Solyc01g091930.2.1 | Tomato | nucleus | 37.12 | 41.14 |
| Solyc01g006660.1.1 | Tomato | extracellular | 36.06 | 40.44 |
| Solyc03g079890.1.1 | Tomato | cytosol | 34.08 | 40.31 |
| Solyc04g081810.2.1 | Tomato | extracellular | 40.82 | 39.46 |
| Solyc03g081260.2.1 | Tomato | cytosol, nucleus, plastid | 38.04 | 39.34 |
| Solyc03g081250.1.1 | Tomato | cytosol, plastid | 22.06 | 36.87 |
| Solyc09g009750.1.1 | Tomato | unclear | 35.53 | 36.16 |
Protein Annotations
| Gene3D:2.60.40.2310 | Gene3D:3.30.70.80 | Gene3D:3.40.50.200 | Gene3D:3.50.30.30 | MapMan:35.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0019538 | InterPro:IPR036852 | InterPro:IPR037045 | UniProt:K4B7G0 | InterPro:PA_domain | PFAM:PF00082 |
| PFAM:PF02225 | PFAM:PF05922 | PRINTS:PR00723 | ScanProsite:PS00138 | PANTHER:PTHR10795 | PANTHER:PTHR10795:SF382 |
| InterPro:Peptidase_S8/S53_dom | InterPro:Peptidase_S8/S53_dom_sf | InterPro:Peptidase_S8_Ser-AS | InterPro:Peptidase_S8_subtilisin-rel | InterPro:Peptidases_S8_3 | InterPro:S8pro/Inhibitor_I9 |
| InterPro:S8pro/Inhibitor_I9_sf | SUPFAM:SSF52743 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g068280.2 | EnsemblPlants:Solyc02g068280.2.1 | UniParc:UPI0002767923 |
Description
No Description!
Coordinates
chr2:+:38262476..38266653
Molecular Weight (calculated)
81853.8 Da
IEP (calculated)
9.594
GRAVY (calculated)
-0.134
Length
757 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSKKTLFL LFVSVFLGEI SLCSSTKLYV VYMGSKDSDE HQDEILRQNH QMLTDIHGGN VEQAKSSHVY SYRHGFKGFA AKLTEKQASE ISKMPGVVSV
101: FPNTKRNLHT THSWDFMGLS EDETMEIPGF STKNQVNVII GFIDTGIWPE SPSFRDTHMP PVPAGWKGQC QSGEAFNASI CNRKIIGARY YMSGYAAEED
201: EKIMFKSARD SSGHGSHTAS TAAGRYVADM NYKGLASGGA RGGAPMARIA VYKTCWSSGC YDVDLLAAFD DAIRDGVHVI SISLGPDAPQ GDYFSDAISV
301: GSFHAVSRGI LVVASVGNEG TSGSATNLAP WMITVAASST DRDFTSDVLL GNRVQLTGES LSLSQMHTSA KIIPASEAYA GYFTPYQSSY CLDSSLNRTK
401: AKGKVLVCRH AGSSSESKLE KSNIVKQAGG VGMILIDEAD KGVAIPFSIP AATVGQKIGK KILAYINNTR LPTARILSAK TVLGAQPAPR VTAFSSRGPN
501: SLTPEILKPD ITAPGLNILA AWSPAMSRLK FNILSGTSMA CPHISGVVAL LKAVHPSWSP SAIKSAIMTT AKLSDMHHKP IIVDPEGKKA NPFDFGSGFV
601: NPTKVLNPGL IYDAQPEDYR AFLCSIGYDE KSLHLITRDN RTCDQTFASP NELNYPSITV PNLRNNYSVS RTVTNVGKSR STYKAVIFAP KGINVTVVPR
701: RLAFTRYYQK MNFTVTFKVA APTQGYVFGS LSWRNKRTWV TSPLVVRVAH SNMGTVV
101: FPNTKRNLHT THSWDFMGLS EDETMEIPGF STKNQVNVII GFIDTGIWPE SPSFRDTHMP PVPAGWKGQC QSGEAFNASI CNRKIIGARY YMSGYAAEED
201: EKIMFKSARD SSGHGSHTAS TAAGRYVADM NYKGLASGGA RGGAPMARIA VYKTCWSSGC YDVDLLAAFD DAIRDGVHVI SISLGPDAPQ GDYFSDAISV
301: GSFHAVSRGI LVVASVGNEG TSGSATNLAP WMITVAASST DRDFTSDVLL GNRVQLTGES LSLSQMHTSA KIIPASEAYA GYFTPYQSSY CLDSSLNRTK
401: AKGKVLVCRH AGSSSESKLE KSNIVKQAGG VGMILIDEAD KGVAIPFSIP AATVGQKIGK KILAYINNTR LPTARILSAK TVLGAQPAPR VTAFSSRGPN
501: SLTPEILKPD ITAPGLNILA AWSPAMSRLK FNILSGTSMA CPHISGVVAL LKAVHPSWSP SAIKSAIMTT AKLSDMHHKP IIVDPEGKKA NPFDFGSGFV
601: NPTKVLNPGL IYDAQPEDYR AFLCSIGYDE KSLHLITRDN RTCDQTFASP NELNYPSITV PNLRNNYSVS RTVTNVGKSR STYKAVIFAP KGINVTVVPR
701: RLAFTRYYQK MNFTVTFKVA APTQGYVFGS LSWRNKRTWV TSPLVVRVAH SNMGTVV
001: MSKTILFLAL FLSIVLNVQI SFVVAESKVY VVYLGEKEHD NPESVTESHH QMLWSLLGSK EAVLDSIVYS YRHGFSGFAA KLTESQAQQI SELPEVVQVI
101: PNTLYEMTTT RTWDYLGVSP GNSDSLLQKA NMGYNVIVGV IDSGVWPESE MFNDKGFGPI PSRWKGGCES GELFNASIHC NRKLIGAKYF VDGLVAEFGV
201: VNRTQNPEYL SPRDFAGHGT HVASTIGGSF LPNVSYVGLG RGTARGGAPG VHIAVYKACW SGYCSGADVL KAMDEAIHDG VDILSLSLGP SVPLFPETEH
301: TSVGAFHAVA KGIPVVIAAG NAGPTAQTIS NVAPWVLTVA ATTQDRSFPT AITLGNNITI LGQAIYGGPE LGFVGLTYPE SPLSGDCEKL SANPNSTMEG
401: KVVLCFAAST PSNAAIAAVI NAGGLGLIMA KNPTHSLTPT RKFPWVSIDF ELGTDILFYI RSTRSPIVKI QASKTLFGQS VSTKVATFSS RGPNSVSPAI
501: LKPDIAAPGV NILAAISPNS SINDGGFAMM SGTSMATPVV SGVVVLLKSL HPDWSPSAIK SAIVTTAWRT DPSGEPIFAD GSSRKLADPF DYGGGLINPE
601: KAVKPGLIYD MTTDDYVMYM CSVDYSDISI SRVLGKITVC PNPKPSVLDL NLPSITIPNL RGEVTLTRTV TNVGPVNSVY KVVIDPPTGI NVAVTPAELV
701: FDYTTTKRSF TVRVSTTHKV NTGYYFGSLT WTDNMHNVAI PVSVRTQILQ RYYDEN
101: PNTLYEMTTT RTWDYLGVSP GNSDSLLQKA NMGYNVIVGV IDSGVWPESE MFNDKGFGPI PSRWKGGCES GELFNASIHC NRKLIGAKYF VDGLVAEFGV
201: VNRTQNPEYL SPRDFAGHGT HVASTIGGSF LPNVSYVGLG RGTARGGAPG VHIAVYKACW SGYCSGADVL KAMDEAIHDG VDILSLSLGP SVPLFPETEH
301: TSVGAFHAVA KGIPVVIAAG NAGPTAQTIS NVAPWVLTVA ATTQDRSFPT AITLGNNITI LGQAIYGGPE LGFVGLTYPE SPLSGDCEKL SANPNSTMEG
401: KVVLCFAAST PSNAAIAAVI NAGGLGLIMA KNPTHSLTPT RKFPWVSIDF ELGTDILFYI RSTRSPIVKI QASKTLFGQS VSTKVATFSS RGPNSVSPAI
501: LKPDIAAPGV NILAAISPNS SINDGGFAMM SGTSMATPVV SGVVVLLKSL HPDWSPSAIK SAIVTTAWRT DPSGEPIFAD GSSRKLADPF DYGGGLINPE
601: KAVKPGLIYD MTTDDYVMYM CSVDYSDISI SRVLGKITVC PNPKPSVLDL NLPSITIPNL RGEVTLTRTV TNVGPVNSVY KVVIDPPTGI NVAVTPAELV
701: FDYTTTKRSF TVRVSTTHKV NTGYYFGSLT WTDNMHNVAI PVSVRTQILQ RYYDEN
Arabidopsis Description
SBT3.9Subtilisin-like protease SBT3.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSB0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.