CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 6
vacuole 5
golgi 5
extracellular 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28969	Soybean	extracellular, plasma membrane	94.76	94.88
KRH07873	Soybean	nucleus	79.82	79.92
KRH39376	Soybean	extracellular, plasma membrane	78.51	78.51
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	73.26	73.26
PGSC0003DMT400024344	Potato	cytosol	68.41	71.9
Solyc02g068280.2.1	Tomato	nucleus	70.51	71.07
GSMUA_Achr1P27960_001	Banana	extracellular, plasma membrane	64.22	64.22
Os06t0624100-00	Rice	cytosol	58.19	59.92
KXG20396	Sorghum	endoplasmic reticulum, extracellular	59.5	58.96
Zm00001d036788_P003	Maize	vacuole	57.27	56.98
KRH15031	Soybean	cytosol, peroxisome	12.58	49.48
KRH30453	Soybean	extracellular, plasma membrane	43.12	43.4
KRH25196	Soybean	extracellular, plasma membrane	42.86	42.8
KRH15035	Soybean	extracellular, plasma membrane	39.84	41.53
KRH61013	Soybean	nucleus	41.15	40.78
KRH33384	Soybean	endoplasmic reticulum, extracellular	38.93	40.46
KRG97819	Soybean	extracellular, plasma membrane	33.29	39.87
KRH33383	Soybean	extracellular	38.4	39.81
KRH31054	Soybean	nucleus	38.4	39.7
KRH61015	Soybean	extracellular	39.97	39.66
KRH58831	Soybean	extracellular	41.15	39.6
KRH51678	Soybean	extracellular, plasma membrane	39.71	39.56
KRH15024	Soybean	nucleus	38.01	39.4
KRH29358	Soybean	extracellular, vacuole	40.37	39.39
KRH20579	Soybean	nucleus	40.1	39.33
KRH51679	Soybean	extracellular, vacuole	39.45	39.09
KRH13238	Soybean	endoplasmic reticulum, extracellular, plasma membrane	39.58	38.87
KRH15033	Soybean	extracellular, plasma membrane	37.48	38.81
KRH67890	Soybean	extracellular, plasma membrane	37.61	38.47
KRH61012	Soybean	mitochondrion, plastid	22.41	38.43
KRH32681	Soybean	extracellular, plasma membrane	36.57	38.11
KRH65185	Soybean	cytosol	12.58	37.8
KRH40552	Soybean	extracellular, golgi	36.44	37.17
KRH15027	Soybean	extracellular	35.26	36.55
KRH61014	Soybean	cytosol, vacuole	18.74	36.29
KRH25195	Soybean	plasma membrane	31.32	36.21
KRH73105	Soybean	nucleus	37.48	35.88

Protein Annotations

EntrezGene:100780538	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1
EMBL:ACUP02000615	EnsemblPlantsGene:GLYMA_01G155900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:I1J896	InterPro:IPR036852
InterPro:IPR037045	EnsemblPlants:KRH76486	ProteinID:KRH76486	ProteinID:KRH76486.1	InterPro:PA_domain	PFAM:PF00082
PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF382
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	TMHMM:TMhelix	UniParc:UPI00023372C5	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:49322583..49327485

Molecular Weight (calculated)

82057.5 Da

IEP (calculated)

9.232

GRAVY (calculated)

-0.129

Length

763 amino acids

Sequence
(BLAST)

001: MSCSNYARST STFFYLFLAV LVANTSFCFS AKVYVVYMGS KTGENPDDIL KHNHQMLAAV HSGSIEQAQA SHVYSYKHAF RGFAAKLTNE QAYQISKMPG
101: VVSVFPNSKR KLHTTHSWDF IGLLDNESME IHGHSTKNQE NIIIGFIDTG IWPESPSFSD TDMPPVPRGW KGHCQLGEAF NASSCNRKVI GARYYMSGHE
201: AEEGSDRKVS FRSARDSSGH GSHTASTAVG RYVANMNYKG LGAGGARGGA PKARIAVYKV CWDSGCYDVD LLAAFDDAIR DGVHIMSLSL GPESPQGDYF
301: DDAVSVASFH AAKHGVLVVA SVGNQGNPGS ATNVAPWIIT VAASSTDRDF TSDITLGNGV NITGESLSLL GMSASRRLID ASEAFTGYFT PYQSSYCVDS
401: SLDKTKAKGK VLVCRHTEYS GESKLEKSKI VKEAGGVGMI LIDEANQGVS TPFVIPSAVV GTKTGERILS YINRTRMPMT RISRAKTVLG VQPAPCVAAF
501: SSKGPNTLTP EILKPDVTAP GLNILAAWSP ASAGMKFNIV SGTSMSCPHV TGIATLVKAV HPSWSPSAIK SAIMTTATIL DKHHQPIRAD PDRRRANAFD
601: YGSGFVNPSR VLDPGLVYDS NPEDFVAFLC SLGYDERSLH LVTKDNSTCD RAFKTPSDLN YPSIAVPNLE DNFSVTRVVT NVGKARSIYK AVVVSPTGVN
701: VTVVPNRLVF TRIGQKIKFT VNFKVAAPSK GYAFGFLSWK NGRTQVTSPL VVKVAPASHG LVR

Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)

001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL

Arabidopsis Description

AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.