CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 5
vacuole 6
golgi 5
extracellular 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51678	Soybean	extracellular, plasma membrane	84.03	84.46
KRH61015	Soybean	extracellular	80.52	80.62
KRH51679	Soybean	extracellular, vacuole	76.23	76.23
KRH61014	Soybean	cytosol, vacuole	38.05	74.37
KRH61012	Soybean	mitochondrion, plastid	39.35	68.09
VIT_18s0001g14870.t01	Wine grape	extracellular	60.52	62.72
PGSC0003DMT400025767	Potato	extracellular, plasma membrane, vacuole	58.05	57.83
Os09t0482660-01	Rice	extracellular	38.44	56.6
Solyc04g081810.2.1	Tomato	extracellular	57.27	56.32
TraesCSU01G025500.1	Wheat	extracellular, vacuole	54.29	53.8
TraesCS2A01G444900.1	Wheat	extracellular, vacuole	53.77	53.35
HORVU2Hr1G102920.1	Barley	extracellular, plasma membrane	54.16	53.19
Solyc01g006660.1.1	Tomato	extracellular	46.49	53.04
GSMUA_Achr4P29490_001	Banana	cytosol, extracellular	46.1	52.67
EER98388	Sorghum	extracellular, plasma membrane	55.32	51.57
AT1G20150.1	Thale cress	extracellular, golgi, vacuole	51.69	51.03
Zm00001d019450_P001	Maize	extracellular, plasma membrane	54.42	50.18
PGSC0003DMT400055014	Potato	cytosol, nucleus, plastid	48.44	49.73
CDY01388	Canola	extracellular, plasma membrane, vacuole	50.0	49.55
Bra012217.1-P	Field mustard	cytosol, plastid	26.1	48.43
KRH13238	Soybean	endoplasmic reticulum, extracellular, plasma membrane	47.92	47.49
KRH20579	Soybean	nucleus	47.66	47.17
KRH15031	Soybean	cytosol, peroxisome	11.17	44.33
CDY67543	Canola	cytosol	49.09	42.09
KRG97819	Soybean	extracellular, plasma membrane	34.68	41.92
KRH33383	Soybean	extracellular	39.35	41.17
KRH76486	Soybean	nucleus	40.78	41.15
KRH28969	Soybean	extracellular, plasma membrane	40.65	41.08
KRH07873	Soybean	nucleus	40.26	40.68
KRH33384	Soybean	endoplasmic reticulum, extracellular	38.44	40.33
KRH65185	Soybean	cytosol	13.25	40.16
KRH31054	Soybean	nucleus	38.44	40.11
KRH39376	Soybean	extracellular, plasma membrane	39.74	40.1
KRH15035	Soybean	extracellular, plasma membrane	37.92	39.89
KRH29358	Soybean	extracellular, vacuole	39.87	39.26
KRH58831	Soybean	extracellular	40.13	38.97
KRH32681	Soybean	extracellular, plasma membrane	36.88	38.8
KRH40552	Soybean	extracellular, golgi	37.66	38.77
KRH67890	Soybean	extracellular, plasma membrane	37.53	38.74
KRH30453	Soybean	extracellular, plasma membrane	38.05	38.65
KRH25196	Soybean	extracellular, plasma membrane	38.05	38.35
KRH15033	Soybean	extracellular, plasma membrane	36.49	38.13
KRH15027	Soybean	extracellular	35.71	37.36
KRH15024	Soybean	nucleus	35.58	37.23
KRH73105	Soybean	nucleus	35.32	34.13
KRH25195	Soybean	plasma membrane	27.66	32.27

Protein Annotations

EntrezGene:100820194	MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30
EMBL:ACUP02002145	EnsemblPlantsGene:GLYMA_04G022300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:I1JT08	InterPro:IPR036852
InterPro:IPR037045	EnsemblPlants:KRH61013	ProteinID:KRH61013	ProteinID:KRH61013.1	InterPro:PA_domain	PFAM:PF00082
PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00137	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF520	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_His-AS	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel
InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000233A08D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:1754775..1758921

Molecular Weight (calculated)

81458.7 Da

IEP (calculated)

6.644

GRAVY (calculated)

-0.116

Length

770 amino acids

Sequence
(BLAST)

001: MKGNNTLLLH LFYTLLLFLG VSAGNGNNDD TNRKEVYIVY MGAADSTNVS LRNDHAQVLN LVLRRNENAL VRNYKHGFSG FAARLSKEEA ASIAHKPGVV
101: SVFPDPILNL HTTRSWEFLK YQTHVKIDTK PNAVSNSSSS SDIILGVLDT GIWPEAASFS DEGMGPVPSR WKGTCMKSQD FNSSNCNRKL IGARFYTDPT
201: GNDDDEGDNT PRDSVGHGTH VASTAVGATV TNASYYGLAA GSATGGSSES RLAVYRVCSN FGCRGSAILG AFDDAISDGV DVLSLSLGAS PGFQPDLTTD
301: PIALGAFHAV ERGILVVCSA GNSGPSSSTV VNDAPWILTV AASTIDRDFQ SDVVLGVDKT VKGRAINFSP LSNSAEYPMI YGESAKAAST SLAEARQCHP
401: DSLDANKVKG KIVVCDGKND GYSTSEKIGT VKEAGGIGLV HITDQNGAIA SYYGDFPATV ISSKDGVTIL QYINSTSNPV ATILPTATVL DYKPAPVVPN
501: FSSRGPSSLS SNILKPDIAA PGVNILAAWI GNNADDVPKG RKPSLYNIIS GTSMACPHVS GLASSVKTRN PTWSASAIKS AIMTSAIQIN NLKAPITTDS
601: GRVATPYDYG AGEMTTSESL QPGLVYETNT IDYLNYLCYI GLNITTVKVI SRTVPANFSC PKDSSSDLIS NINYPSIAVN FTGKAAVNVS RTVTNVGEED
701: ETAYSPVVEA PSGVKVTVTP DKLQFTKSSK KLGYQVIFSS TLTSLKEDLF GSITWSNGKY MVRSPFVLTK

Best Arabidopsis Sequence Match ( AT1G20160.1 )
(BLAST)

001: MKGITFFTPF LSFLYLLCIL FMTETEAGSR NGDGVYIVYM GSASSAANAN RAQILINTMF KRRANDLLHT YKHGFSGFAA RLTAEEAKVI AKKPGVVSVF
101: PDPHFQLHTT HSWDFLKYQT SVKVDSGPPS SASDGSYDSI VGILDTGIWP ESESFNDKDM GPIPSRWKGT CMEAKDFKSS NCNRKIIGAR YYKNPDDDSE
201: YYTTRDVIGH GSHVSSTIAG SAVENASYYG VASGTAKGGS QNARIAMYKV CNPGGCTGSS ILAAFDDAIA DGVDVLSLSL GAPAYARIDL NTDPIAIGAF
301: HAVEQGILVI CSAGNDGPDG GTVTNTAPWI MTVAANTIDR DFESDVVLGG NKVIKGEGIH FSNVSKSPVY PLIHGKSAKS ADASEGSARA CDSDSLDQEK
401: VKGKIVLCEN VGGSYYASSA RDEVKSKGGT GCVFVDDRTR AVASAYGSFP TTVIDSKEAA EIFSYLNSTK DPVATILPTA TVEKFTPAPA VAYFSSRGPS
501: SLTRSILKPD ITAPGVSILA AWTGNDSSIS LEGKPASQYN VISGTSMAAP HVSAVASLIK SQHPTWGPSA IRSAIMTTAT QTNNDKGLIT TETGATATPY
601: DSGAGELSST ASMQPGLVYE TTETDYLNFL CYYGYNVTTI KAMSKAFPEN FTCPADSNLD LISTINYPSI GISGFKGNGS KTVTRTVTNV GEDGEAVYTV
701: SVETPPGFNI QVTPEKLQFT KDGEKLTYQV IVSATASLKQ DVFGALTWSN AKYKVRSPIV ISSESSRTN

Arabidopsis Description

CRSPCO(2)-response secreted protease [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.