Factsheet for VIT_18s0001g14870.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
extracellular 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 23391302
extracellular: 26106900

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

msms PMID: 26106900 doi

C Guillier, M Gamm, G Lucchi, C Truntzer, D Pecqueur, P Ducoroy, M Adrian, MC Héloir

Clinical Innovation Proteomic Platform - CLIPP, 15 Boulevard Maréchal de Lattre de Tassigny, BP37013, F-21070 Dijon cedex, France., CNRS, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;, Université de Bourgogne, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025767	Potato	extracellular, plasma membrane, vacuole	67.56	64.94
Solyc04g081810.2.1	Tomato	extracellular	68.1	64.62
KRH51678	Soybean	extracellular, plasma membrane	63.53	61.62
KRH61013	Soybean	nucleus	62.72	60.52
Os09t0482660-01	Rice	extracellular	41.99	59.66
KRH61012	Soybean	mitochondrion, plastid	35.4	59.1
KRH61015	Soybean	extracellular	61.1	59.04
Solyc01g006660.1.1	Tomato	extracellular	53.3	58.67
GSMUA_Achr4P29490_001	Banana	cytosol, extracellular	51.82	57.12
KRH51679	Soybean	extracellular, vacuole	59.08	57.01
PGSC0003DMT400055014	Potato	cytosol, nucleus, plastid	57.07	56.53
KRH61014	Soybean	cytosol, vacuole	29.61	55.84
TraesCSU01G025500.1	Wheat	extracellular, vacuole	57.74	55.21
TraesCS2A01G444900.1	Wheat	extracellular, vacuole	57.34	54.9
HORVU2Hr1G102920.1	Barley	extracellular, plasma membrane	57.6	54.59
AT1G20150.1	Thale cress	extracellular, golgi, vacuole	57.2	54.49
CDY01388	Canola	extracellular, plasma membrane, vacuole	55.99	53.54
Bra012217.1-P	Field mustard	cytosol, plastid	29.61	53.01
EER98388	Sorghum	extracellular, plasma membrane	57.74	51.94
Zm00001d019450_P001	Maize	extracellular, plasma membrane	58.01	51.62
VIT_13s0047g00200.t01	Wine grape	cytosol	46.16	46.29
CDY67543	Canola	cytosol	55.85	46.21
VIT_02s0025g02860.t01	Wine grape	cytosol	24.23	44.34
VIT_13s0019g02600.t01	Wine grape	cytosol	37.15	42.46
VIT_06s0004g04830.t01	Wine grape	cytosol	39.84	42.11
VIT_06s0009g01220.t01	Wine grape	cytosol	39.43	41.98
VIT_13s0019g02620.t01	Wine grape	cytosol	36.34	41.8
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	39.57	41.53
VIT_13s0019g02560.t01	Wine grape	cytosol	38.9	41.46
VIT_13s0019g02580.t01	Wine grape	plastid	39.17	41.45
VIT_13s0019g02640.t01	Wine grape	cytosol	35.53	41.31
VIT_02s0025g02880.t01	Wine grape	cytosol	40.92	41.25
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	36.88	41.2
VIT_13s0019g02610.t01	Wine grape	cytosol	37.42	40.94
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	39.03	40.67
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	41.86	40.44
VIT_02s0025g04600.t01	Wine grape	cytosol	39.84	40.44
VIT_06s0004g05620.t01	Wine grape	cytosol	18.04	40.36
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	40.38	40.21
VIT_06s0004g05630.t01	Wine grape	cytosol	39.57	40.16
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	39.17	40.14
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	39.7	40.08
VIT_08s0007g03650.t01	Wine grape	cytosol	37.95	39.89
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	40.92	39.84
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.07	39.76
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	39.03	39.56
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	39.7	39.23
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	41.05	39.2
VIT_16s0022g02460.t01	Wine grape	cytosol	33.65	38.52
VIT_02s0025g02850.t01	Wine grape	mitochondrion	40.65	38.52
VIT_06s0004g05590.t01	Wine grape	cytosol	30.42	38.44
VIT_03s0038g00470.t01	Wine grape	plastid	41.59	38.39
VIT_16s0100g00060.t01	Wine grape	nucleus	37.82	37.42
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	39.84	37.23
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	39.3	37.1
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	36.88	35.49
VIT_13s0019g02480.t01	Wine grape	nucleus	39.03	29.03
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	36.61	25.05
VIT_13s0019g02590.t01	Wine grape	cytosol	37.28	20.23
VIT_13s0019g02490.t01	Wine grape	extracellular	40.11	20.07
VIT_15s0048g01200.t01	Wine grape	plasma membrane	38.49	18.52

Protein Annotations

EntrezGene:100257482	wikigene:100257482	MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	ProteinID:CBI19918	ProteinID:CBI19918.3	UniProt:E0CQB3	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100257482	wikigene:LOC100257482	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00137	ScanProsite:PS00138
PANTHER:PTHR10795	PANTHER:PTHR10795:SF520	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_His-AS	InterPro:Peptidase_S8_Ser-AS
InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI0001BE1824
ArrayExpress:VIT_18s0001g14870	EnsemblPlantsGene:VIT_18s0001g14870	EnsemblPlants:VIT_18s0001g14870.t01	unigene:Vvi.14471	RefSeq:XP_002269753	RefSeq:XP_002269753.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:12908766..12912392

Molecular Weight (calculated)

78948.6 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.209

Length

743 amino acids

Sequence
(BLAST)

001: MKNDRIYIVY MGAATSSEGS YRYDHAQILS SLLKRKANAL VHSYRHGFSG FAAHLTEEEA RSIAQKPGVV SVFEDPVLQL HTTRSWDFLH YQTDLETDSK
101: PGSDGDSQSS GQADTIIGIL DTGIWPESES FSDKTMGPVP SRWRGTCMES NDVDSFKCNR KLIGARYYND SDAASAVPHT ARDMIGHGTH VASTAAGNSL
201: PDVSYYGLAS GTAKGGSPGS RIAMYRVCTF FGCRGSSILA AFDDAISDGV DVLSLSLGSS AVFELEFSTD PIAIGAYHAV AKGITVVCSA GNDGPSPQTV
301: VNIAPWILTV GATTIDRDFE SDVVLGGNKV IKGEGINFAN IKKSPAYPLI YGSSAKSNSS KVDDARNCKP NSLGEDKIKG RIVLCDNDDG EYTQTEKLEE
401: VKRLGGVGLI LIEDETRAVA SRYGAFPLTV ITSKDASEIL SYINSTRNPV ATILATVSVE QYKPAPAVAY FSSRGPSYAT KNLLKPDIAA PGVNILAAWI
501: GNDTAEAPAG KEPPLFNLLS GTSMACPHVS GIAATVKSQN PSWSPSAIRS AIMTTATQKN NLKAPITTHS GSVATPYDYG AGEVSPSGPL QPGLVYETDT
601: ADYLQFLCNH GYDISKIKLI SPTLPDGFTC PKNANADLIS NMNYPSIAIS KFNGNESKKV SRTVTNVGSD DETQYTVSVS AAAGVDVKVI PDTLKFTKNS
701: KKLSYQVIFS SNGSSSVKGA VFGSITWTNG KHKVRSPFVV SSD

Best Arabidopsis Sequence Match ( AT1G20160.1 )
(BLAST)

001: MKGITFFTPF LSFLYLLCIL FMTETEAGSR NGDGVYIVYM GSASSAANAN RAQILINTMF KRRANDLLHT YKHGFSGFAA RLTAEEAKVI AKKPGVVSVF
101: PDPHFQLHTT HSWDFLKYQT SVKVDSGPPS SASDGSYDSI VGILDTGIWP ESESFNDKDM GPIPSRWKGT CMEAKDFKSS NCNRKIIGAR YYKNPDDDSE
201: YYTTRDVIGH GSHVSSTIAG SAVENASYYG VASGTAKGGS QNARIAMYKV CNPGGCTGSS ILAAFDDAIA DGVDVLSLSL GAPAYARIDL NTDPIAIGAF
301: HAVEQGILVI CSAGNDGPDG GTVTNTAPWI MTVAANTIDR DFESDVVLGG NKVIKGEGIH FSNVSKSPVY PLIHGKSAKS ADASEGSARA CDSDSLDQEK
401: VKGKIVLCEN VGGSYYASSA RDEVKSKGGT GCVFVDDRTR AVASAYGSFP TTVIDSKEAA EIFSYLNSTK DPVATILPTA TVEKFTPAPA VAYFSSRGPS
501: SLTRSILKPD ITAPGVSILA AWTGNDSSIS LEGKPASQYN VISGTSMAAP HVSAVASLIK SQHPTWGPSA IRSAIMTTAT QTNNDKGLIT TETGATATPY
601: DSGAGELSST ASMQPGLVYE TTETDYLNFL CYYGYNVTTI KAMSKAFPEN FTCPADSNLD LISTINYPSI GISGFKGNGS KTVTRTVTNV GEDGEAVYTV
701: SVETPPGFNI QVTPEKLQFT KDGEKLTYQV IVSATASLKQ DVFGALTWSN AKYKVRSPIV ISSESSRTN

Arabidopsis Description

CRSPCO(2)-response secreted protease [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.