Factsheet for VIT_13s0019g02480.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 1
cytosol 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	53.35	71.45
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	53.55	71.14
VIT_13s0019g02560.t01	Wine grape	cytosol	48.15	69.01
VIT_13s0019g02600.t01	Wine grape	cytosol	44.34	68.15
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	53.55	67.98
VIT_13s0019g02620.t01	Wine grape	cytosol	43.84	67.8
VIT_13s0019g02640.t01	Wine grape	cytosol	42.94	67.14
VIT_13s0019g02610.t01	Wine grape	cytosol	45.45	66.86
VIT_13s0019g02580.t01	Wine grape	plastid	45.75	65.1
KRH15031	Soybean	cytosol, peroxisome	12.31	63.4
KRH33384	Soybean	endoplasmic reticulum, extracellular	44.44	60.49
KRH15035	Soybean	extracellular, plasma membrane	44.24	60.38
KRH33383	Soybean	extracellular	43.84	59.51
KRH31054	Soybean	nucleus	43.84	59.35
KRG97819	Soybean	extracellular, plasma membrane	37.24	58.4
KRH15033	Soybean	extracellular, plasma membrane	41.54	56.31
KRH15024	Soybean	nucleus	41.04	55.71
VIT_02s0025g04600.t01	Wine grape	cytosol	40.54	55.33
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	36.74	55.19
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.44	54.01
KRH15027	Soybean	extracellular	39.14	53.12
VIT_06s0004g05620.t01	Wine grape	cytosol	17.22	51.81
VIT_16s0022g02460.t01	Wine grape	cytosol	33.53	51.62
VIT_06s0009g01220.t01	Wine grape	cytosol	35.74	51.15
VIT_06s0004g04830.t01	Wine grape	cytosol	35.84	50.92
KRH73105	Soybean	nucleus	40.44	50.69
VIT_06s0004g05590.t01	Wine grape	cytosol	29.53	50.17
VIT_16s0100g00060.t01	Wine grape	nucleus	37.54	49.93
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	34.43	48.25
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	34.13	48.16
VIT_06s0004g05630.t01	Wine grape	cytosol	34.63	47.27
VIT_08s0007g03650.t01	Wine grape	cytosol	33.33	47.1
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	34.33	46.6
VIT_02s0025g02860.t01	Wine grape	cytosol	17.32	42.61
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	29.63	40.83
VIT_13s0047g00200.t01	Wine grape	cytosol	29.73	40.08
VIT_02s0025g02880.t01	Wine grape	cytosol	29.23	39.62
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	30.13	39.14
VIT_18s0001g14870.t01	Wine grape	extracellular	29.03	39.03
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	29.53	37.92
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	28.83	37.75
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	27.23	37.11
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	28.13	36.4
VIT_02s0025g02850.t01	Wine grape	mitochondrion	28.43	36.22
VIT_03s0038g00470.t01	Wine grape	plastid	29.13	36.15
VIT_13s0019g02490.t01	Wine grape	extracellular	53.45	35.96
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	37.74	34.71
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	27.13	34.09
VIT_13s0019g02590.t01	Wine grape	cytosol	41.94	30.61
VIT_15s0048g01200.t01	Wine grape	plasma membrane	33.23	21.5

Protein Annotations

EntrezGene:100244497	wikigene:100244497	MapMan:19.4.2.1.4	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	ProteinID:CBI31603	ProteinID:CBI31603.3	UniProt:D7TLL6	EMBL:FN595998	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100244497
wikigene:LOC100244497	PFAM:PF00082	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF348	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
MEROPS:S08.092	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI0001BE3D67	ArrayExpress:VIT_13s0019g02480
EnsemblPlantsGene:VIT_13s0019g02480	EnsemblPlants:VIT_13s0019g02480.t01	RefSeq:XP_002277563	RefSeq:XP_002277563.1	SEG:seg	:

Description

No Description!

Coordinates

chr13:+:3719037..3728116

Molecular Weight (calculated)

106698.0 Da

IEP (calculated)

5.560

GRAVY (calculated)

0.020

Length

999 amino acids

Sequence
(BLAST)

001: MGDKPSGDIS AVTAHTNMLQ QVFGSNIASD SLLYSYKRSF NGFVVKLTEE EMKELEGMDG VVSIFPNEKK KLHTTRSWDF IGFPQQVNRT SVESDVIIAV
101: LDTGIWPESD SFKDKGFGPP PSKWKGICQG LSNFTCNNKI IGARYYRSYG EFSPEDLQTP RDSEGHGTHT ASTAAGGLVS MASLLGFGLG TARGGVPSAR
201: IAVYKICWSD GCADADILAA FDDAIADGVD IISLSVGGST PKNYFADSIA IGAFHAMKNG ILTSTSAGND GPNFASITNF SPWSLSVAAS TIDRKFFTKV
301: QLGDSKVYEG ISINTFEPNG MYPFIYGGDA PNITGGFSAN TSRFCTRNSL DPNLVKGKIV LCDIFSNGTG AFLAGAVGTV MADRGAKDSA WPFPLPASYL
401: GAQDGSSIAY YVTSTSNPTA SILKSTEVND TLAPFIVSFS SRGPNPATLD ILKPDLAAPG VHILAAWPPI SPISGVQGDT RAVLYTMQSG TSMACPHATG
501: AAAYIKSFHP TWSPAAIKSA LMTTALPMSA EKNPDAEFAY GAGQIDPLKS VNPGLVYDAD KIDYVKFLCG QGYTTQTLQL VTGDNSVCSE ATNGTVWDLN
601: YPSFALSSST FESITGVFTR TVTNVGSPVS TYKATVTGAP IGLQIQVVPD ILSFTSLGQK LSFVLKVEGK VGDNIVSASL VWDDGVHQVR SPIVVSILCT
701: WGTFQRVMCR LQPFILTCYI KCLTAMDGVV TVFPNGKKKL LTTRSWDFMG FPQEVKRTAT ESDIIIGMLD SGIWPLVSVM KDSVLHQANG RVLVKPHPIS
801: LATIKSLELN TTEGQLEEGF PLLASQCTRY VCQMVVKLGN NKVYEGVSIN TFEMKGMYPI IYGGDATNTT GGYNSSSSSL VNGKILFCDS DTDGWEQRIL
901: YFKMNATMIF PPIVEVEDKL APFVASFSSR GPNPVTSDIL KPDLTAPGVD IVAAWTKAST VTGYDWDTRV VPYNIVSGPS MACPNASGAA AYVKSFHPT

Best Arabidopsis Sequence Match ( AT3G46840.1 )
(BLAST)

001: MTKPAVSYCL LSCIFALLVV SFASADKDDQ DKQEYIVYMG ALPARVDYMP MSHHTSILQD VTGESSIEDR LVRNYKRSFN GFAARLTKSE REILASMDEV
101: VSVFPNKKLK LQTTTSWNFM GLKESKRTKR NTIIESDTII GVIDSGIYPE SDSFSGKGFG PPPKKWKGVC KGGKNFTWNN KLIGARYYTP KLEGFPESAR
201: DYMGHGSHTA STAAGNAVKH VSFYGLGNGT ARGGVPAARI AVYKVCDPGV DGCTTDGILA AFDDAIADKV DIITISIGGD NSSPFEEDPI AIGAFHAMAK
301: GILIVNSAGN SGPEPSTVAS IAPWMFTVAA SNTNRAFVTK VVLGNGKTVG RSVNSFDLNG KKYPLVYGKS ASSSCGAASA GFCSPGCLDS KRVKGKIVLC
401: DSPQNPDEAQ AMGAIASIVR SHRTDVASIF SFPVSVLLED DYNTVLSYMN STKNPKAAVL KSETIFNQRA PVVASYFSRG PNTIIPDILK PDITAPGSEI
501: VAAYSPDAPP SISDTRRVKY SVDTGTSMSC PHVAGVAAYL KSFHPRWSPS MIQSAIMTTA WPMNASTSPF NELAEFAYGA GHVDPITAIH PGLVYEANKS
601: DHIAFLCGLN YTAKNLRLIS GDSSSCTKEQ TKSLPRNLNY PSMTAQVSAA KPFKVIFRRT VTNVGRPNAT YKAKVVGSKL KVKVVPAVLS LKSLYEKKSF
701: TVTASGAGPK AENLVSAQLI WSDGVHFVRS PIVVYATN

Arabidopsis Description

SBT4.5Subtilisin-like protease SBT4.5 [Source:UniProtKB/Swiss-Prot;Acc:F4JA91]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.