Factsheet for VIT_13s0019g02580.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 2
extracellular 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g02600.t01	Wine grape	cytosol	68.23	73.69
VIT_13s0019g02620.t01	Wine grape	cytosol	65.81	71.52
VIT_13s0019g02560.t01	Wine grape	cytosol	70.94	71.45
VIT_13s0019g02610.t01	Wine grape	cytosol	67.95	70.25
VIT_13s0019g02640.t01	Wine grape	cytosol	60.26	66.2
PGSC0003DMT400091877	Potato	cytosol	31.62	60.66
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	63.11	58.91
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	61.54	57.91
Solyc03g079890.1.1	Tomato	cytosol	52.56	57.66
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	63.96	57.05
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	51.0	53.83
VIT_02s0025g04600.t01	Wine grape	cytosol	55.84	53.55
VIT_06s0004g05620.t01	Wine grape	cytosol	23.93	50.6
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	48.29	50.3
VIT_16s0022g02460.t01	Wine grape	cytosol	46.15	49.92
VIT_06s0009g01220.t01	Wine grape	cytosol	49.57	49.86
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	50.43	49.65
VIT_16s0100g00060.t01	Wine grape	nucleus	52.71	49.27
VIT_06s0004g04830.t01	Wine grape	cytosol	49.29	49.22
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	48.43	48.02
VIT_06s0004g05590.t01	Wine grape	cytosol	40.03	47.79
VIT_06s0004g05630.t01	Wine grape	cytosol	49.0	46.99
VIT_08s0007g03650.t01	Wine grape	cytosol	46.3	45.97
VIT_13s0019g02480.t01	Wine grape	nucleus	65.1	45.75
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	47.01	44.84
VIT_13s0019g02590.t01	Wine grape	cytosol	83.62	42.88
VIT_02s0025g02860.t01	Wine grape	cytosol	23.93	41.38
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	42.17	40.83
VIT_13s0047g00200.t01	Wine grape	cytosol	42.02	39.81
VIT_18s0001g14870.t01	Wine grape	extracellular	41.45	39.17
VIT_02s0025g02880.t01	Wine grape	cytosol	40.74	38.81
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	42.17	38.05
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	41.31	38.01
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	41.17	37.58
VIT_02s0025g02850.t01	Wine grape	mitochondrion	41.6	37.24
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	38.46	36.83
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	40.17	36.53
VIT_03s0038g00470.t01	Wine grape	plastid	41.03	35.78
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	38.18	33.71
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	50.0	32.32
VIT_13s0019g02490.t01	Wine grape	extracellular	61.68	29.16
VIT_15s0048g01200.t01	Wine grape	plasma membrane	45.58	20.73

Protein Annotations

EntrezGene:100256451	wikigene:100256451	EntrezGene:100261541	wikigene:100261541	MapMan:19.4.2.1.4	Gene3D:2.60.40.2310
Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	ProteinID:CCB56294	ProteinID:CCB56294.1	UniProt:F6HNS5
EMBL:FN595998	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852
InterPro:IPR037045	EntrezGene:LOC100256451	wikigene:LOC100256451	EntrezGene:LOC100261541	wikigene:LOC100261541	PFAM:PF00082
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF519	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.092	InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI0002107FD8	ArrayExpress:VIT_13s0019g02580	EnsemblPlantsGene:VIT_13s0019g02580	EnsemblPlants:VIT_13s0019g02580.t01
RefSeq:XP_002277283	RefSeq:XP_002277283.2	RefSeq:XP_002277296	RefSeq:XP_002277296.2	SEG:seg	:

Description

No Description!

Coordinates

chr13:-:3818267..3821279

Molecular Weight (calculated)

73901.9 Da

IEP (calculated)

5.543

GRAVY (calculated)

-0.090

Length

702 amino acids

Sequence
(BLAST)

001: MGDLPKGGAL SLSSFHTNML QEVVGSSSAS KYLLHSYKKS FNGFVAELTK EEMKRLSAMK GVVSVFPNEK KQLLTTRSWD FMGFPQKATR NTTESDIVVG
101: VLDSGIWPES ASFNDKGFGP PPSKWKGTCD SSANFTCNNK IIGARYYRSS GSIPEGEFES ARDANGHGTH TASTAAGGIV DDASLLGVAS GTARGGVPSA
201: RIAVYKICWS DGCFSADILA AFDDAIADGV DIISLSVGGS SPNDYFRDPI AIGAFHSMKN GILTSNSAGN SGPDLASITN FSPWSLSVAA STIDRKFLTK
301: LVLGDNQVYE DSISLNTFKM EDMLPIIYAG DAPNKAGGFT GSESRYCYED SLDKSLVTGK IVLCDETSQG QAVLAAGAAG TIIPDDGNEG RTFSFPVPTS
401: CLDTSNISKI QQYMNSASNP TAKIERSMAV KEESAPIVAL FSSRGPNPIT SDILSPDITA PGVQILAAWA EASPLTDVPG DERVAKYNII SGTSMSCPHA
501: SGAAAYVKSF HPTWSPAAIK SALMTTATPM NVKTNTDLEF AYGAGHLNPV KAANPGLVYD AGAADYVKFL CGQGYSTENL RLITGDSSTC TKATNGTVWD
601: LNYPSFALSI SAGETVTRTF TRTVTNVGSP VSTYKVKVTA PPGLTVKVEP PVLTFKSVGQ RQTFTVTATA AGNESILSGS LVWDDGVFQV RSPIVAFAPA
701: FK

Best Arabidopsis Sequence Match ( AT3G46840.1 )
(BLAST)

001: MTKPAVSYCL LSCIFALLVV SFASADKDDQ DKQEYIVYMG ALPARVDYMP MSHHTSILQD VTGESSIEDR LVRNYKRSFN GFAARLTKSE REILASMDEV
101: VSVFPNKKLK LQTTTSWNFM GLKESKRTKR NTIIESDTII GVIDSGIYPE SDSFSGKGFG PPPKKWKGVC KGGKNFTWNN KLIGARYYTP KLEGFPESAR
201: DYMGHGSHTA STAAGNAVKH VSFYGLGNGT ARGGVPAARI AVYKVCDPGV DGCTTDGILA AFDDAIADKV DIITISIGGD NSSPFEEDPI AIGAFHAMAK
301: GILIVNSAGN SGPEPSTVAS IAPWMFTVAA SNTNRAFVTK VVLGNGKTVG RSVNSFDLNG KKYPLVYGKS ASSSCGAASA GFCSPGCLDS KRVKGKIVLC
401: DSPQNPDEAQ AMGAIASIVR SHRTDVASIF SFPVSVLLED DYNTVLSYMN STKNPKAAVL KSETIFNQRA PVVASYFSRG PNTIIPDILK PDITAPGSEI
501: VAAYSPDAPP SISDTRRVKY SVDTGTSMSC PHVAGVAAYL KSFHPRWSPS MIQSAIMTTA WPMNASTSPF NELAEFAYGA GHVDPITAIH PGLVYEANKS
601: DHIAFLCGLN YTAKNLRLIS GDSSSCTKEQ TKSLPRNLNY PSMTAQVSAA KPFKVIFRRT VTNVGRPNAT YKAKVVGSKL KVKVVPAVLS LKSLYEKKSF
701: TVTASGAGPK AENLVSAQLI WSDGVHFVRS PIVVYATN

Arabidopsis Description

SBT4.5Subtilisin-like protease SBT4.5 [Source:UniProtKB/Swiss-Prot;Acc:F4JA91]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.