Factsheet for VIT_04s0044g01970.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
mitochondrion 1
extracellular 4
endoplasmic reticulum 2
plasma membrane 3
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024344	Potato	cytosol	72.08	75.76
KRH07873	Soybean	nucleus	75.36	75.46
KRH39376	Soybean	extracellular, plasma membrane	74.57	74.57
Solyc02g068280.2.1	Tomato	nucleus	73.53	74.11
KRH76486	Soybean	nucleus	73.26	73.26
KRH28969	Soybean	extracellular, plasma membrane	72.87	72.97
GSMUA_Achr1P27960_001	Banana	extracellular, plasma membrane	67.23	67.23
Os06t0624100-00	Rice	cytosol	61.86	63.7
KXG20396	Sorghum	endoplasmic reticulum, extracellular	62.39	61.82
Zm00001d036788_P003	Maize	vacuole	60.42	60.1
VIT_13s0019g02640.t01	Wine grape	cytosol	36.3	43.35
VIT_02s0025g02880.t01	Wine grape	cytosol	41.81	43.28
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	41.02	43.17
VIT_13s0019g02560.t01	Wine grape	cytosol	39.06	42.75
VIT_02s0025g02860.t01	Wine grape	cytosol	22.67	42.61
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	37.09	42.56
VIT_06s0004g05620.t01	Wine grape	cytosol	18.48	42.47
VIT_13s0019g02600.t01	Wine grape	cytosol	35.78	42.0
VIT_02s0025g04600.t01	Wine grape	cytosol	39.84	41.53
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	38.53	41.53
VIT_13s0047g00200.t01	Wine grape	cytosol	40.24	41.43
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	42.2	41.39
VIT_13s0019g02580.t01	Wine grape	plastid	38.01	41.31
VIT_13s0019g02620.t01	Wine grape	cytosol	34.86	41.18
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.3	41.1
VIT_13s0019g02610.t01	Wine grape	cytosol	36.57	41.09
VIT_18s0001g14870.t01	Wine grape	extracellular	39.84	40.92
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	39.19	40.62
VIT_06s0009g01220.t01	Wine grape	cytosol	37.09	40.54
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	38.66	40.25
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	40.5	40.18
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	37.48	40.11
VIT_08s0007g03650.t01	Wine grape	cytosol	37.09	40.03
VIT_06s0004g05630.t01	Wine grape	cytosol	38.4	40.03
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	38.79	39.36
VIT_16s0022g02460.t01	Wine grape	cytosol	33.42	39.29
VIT_03s0038g00470.t01	Wine grape	plastid	41.42	39.25
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	38.14	39.01
VIT_06s0004g04830.t01	Wine grape	cytosol	35.78	38.83
VIT_02s0025g02850.t01	Wine grape	mitochondrion	39.84	38.78
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	39.06	38.6
VIT_16s0100g00060.t01	Wine grape	nucleus	37.88	38.48
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	39.71	38.11
VIT_06s0004g05590.t01	Wine grape	cytosol	28.96	37.59
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	38.01	36.85
VIT_13s0019g02480.t01	Wine grape	nucleus	37.75	28.83
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	37.48	26.34
VIT_13s0019g02590.t01	Wine grape	cytosol	35.65	19.87
VIT_13s0019g02490.t01	Wine grape	extracellular	38.14	19.6
VIT_15s0048g01200.t01	Wine grape	plasma membrane	38.27	18.91

Protein Annotations

EntrezGene:100246533	wikigene:100246533	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30
MapMan:35.1	EMBL:AM426052	ProteinID:CAN68992	ProteinID:CAN68992.1	ProteinID:CCB60374	ProteinID:CCB60374.1
UniProt:F6I0A8	EMBL:FN596506	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100246533	wikigene:LOC100246533	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF382	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	TMHMM:TMhelix	UniParc:UPI000210A576	ArrayExpress:VIT_04s0044g01970
EnsemblPlantsGene:VIT_04s0044g01970	EnsemblPlants:VIT_04s0044g01970.t01	RefSeq:XP_002263237	RefSeq:XP_002263237.2	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:23760772..23765243

Molecular Weight (calculated)

81966.3 Da

IEP (calculated)

8.436

GRAVY (calculated)

-0.079

Length

763 amino acids

Sequence
(BLAST)

001: MEMASLHYRS SRILHLFVGV FVAQLTISLS AKVYVVYMGS RTSDDPDEIL RQNHQMLTAV HKGSTERAQA SHVYSYRHGF KGFAAKLTEQ QASEMANMPG
101: VVSVFPNLKR RLHTTHSWDF MGLVGEETME IPGYSTKNQE NVIIGFIDTG IWPESPSFSD DNMPSIPAGW NGQCQSGEAF NASSCNRKVI GARYYLSGYE
201: AEEDLITSVS FKSPRDSSGH GSHTASTAAG RHVTNMNYKG LAAGGARGGA PMARIAVYKT CWASGCYDVD LLAAFDDAIR DGVHILSLSL GPEAPQGDYF
301: NDAISLGSFH AASHGVVVVA SVGNEGSQGS ATNLAPWMIT VAASSTDRDF TSDIVLGDGA NFTGESLSLF EMNASTSIIS ASEAYAGYFT PYQSSYCLES
401: SLNNTKTRGK ILVCQHAESS TDSKLAKSAV VREAGGVGMI LIDEADKDVA IPFVIPAAIV GRGTGGRILS YINHTRKPVS RIFPAKTVLG SHPAPRVAAF
501: SSKGPNALNP EILKPDVSAP GLNILAAWSP AIEKMHFNIL SGTSMACPHV TGIVALVKAV HPSWSPSAIK SAIMTTATIL DKNRRSITVD PEGRKGNAFD
601: YGSGFVNPTR VLDPGLIYDT EPTDYKAFLC SIGYSEKLLH LITRDNSTCD QTFATASALN YPSITVPNLK DNSSVSRTVT NVGKPRSIYK AVVSAPTGIN
701: VTVVPHRLIF SHYGQKINFT VHLKVAAPSH SYVFGFLSWR NKYTRVTSPL VVRVAPTSLG LMR

Best Arabidopsis Sequence Match ( AT2G04160.1 )
(BLAST)

001: MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK
101: HPEVVSVFPN KALKLHTTRS WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ NQKDATFHCN RKLIGARYFN
201: KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE
301: PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL
401: DAQLCKLGSL DPIKTKGKIL VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI SQTKKPIAHI TPSRTDLGLK
501: PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI
601: PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG
701: RPSMYTVKVN NPQGVYVAVK PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL

Arabidopsis Description

AIR3Subtilisin-like protease SBT5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSP5]
SUBAcon: [vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.