Factsheet for VIT_13s0019g02620.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

endoplasmic reticulum 1
plasma membrane 2
vacuole 2
golgi 2
extracellular 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	golgi, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g02610.t01	Wine grape	cytosol	92.11	87.63
VIT_13s0019g02600.t01	Wine grape	cytosol	83.75	83.23
VIT_13s0019g02640.t01	Wine grape	cytosol	68.58	69.33
VIT_13s0019g02560.t01	Wine grape	cytosol	73.68	68.29
VIT_13s0019g02580.t01	Wine grape	plastid	71.52	65.81
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	63.31	54.39
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	62.54	54.16
Solyc03g079890.1.1	Tomato	cytosol	53.1	53.59
PGSC0003DMT400091877	Potato	cytosol	29.72	52.46
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	63.62	52.22
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	53.1	51.58
VIT_06s0004g05620.t01	Wine grape	cytosol	26.32	51.2
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	53.41	51.19
VIT_02s0025g04600.t01	Wine grape	cytosol	57.74	50.96
VIT_16s0022g02460.t01	Wine grape	cytosol	50.93	50.69
VIT_06s0004g05590.t01	Wine grape	cytosol	42.41	46.6
VIT_06s0004g04830.t01	Wine grape	cytosol	50.62	46.51
VIT_16s0100g00060.t01	Wine grape	nucleus	53.56	46.07
VIT_06s0009g01220.t01	Wine grape	cytosol	49.38	45.7
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	48.76	44.49
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	49.07	44.46
VIT_06s0004g05630.t01	Wine grape	cytosol	50.0	44.13
VIT_13s0019g02480.t01	Wine grape	nucleus	67.8	43.84
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	49.54	43.48
VIT_08s0007g03650.t01	Wine grape	cytosol	47.21	43.14
VIT_02s0025g02860.t01	Wine grape	cytosol	25.39	40.39
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	43.19	38.48
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	45.05	37.84
VIT_13s0047g00200.t01	Wine grape	cytosol	43.03	37.52
VIT_02s0025g02880.t01	Wine grape	cytosol	41.49	36.36
VIT_18s0001g14870.t01	Wine grape	extracellular	41.8	36.34
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	42.88	35.6
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	40.09	35.33
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	41.18	34.86
VIT_02s0025g02850.t01	Wine grape	mitochondrion	41.8	34.44
VIT_03s0038g00470.t01	Wine grape	plastid	42.57	34.16
VIT_13s0019g02590.t01	Wine grape	cytosol	72.14	34.04
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	40.25	33.68
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	55.26	32.87
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	40.09	32.58
VIT_13s0019g02490.t01	Wine grape	extracellular	62.69	27.27
VIT_15s0048g01200.t01	Wine grape	plasma membrane	50.0	20.92

Protein Annotations

EntrezGene:100259792	wikigene:100259792	MapMan:19.4.2.1.4	Gene3D:2.60.40.2310	Gene3D:3.40.50.200	Gene3D:3.50.30.30
ProteinID:CCB56291	ProteinID:CCB56291.1	UniProt:F6HNS2	EMBL:FN595998	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	EntrezGene:LOC100259792	wikigene:LOC100259792	PFAM:PF00082
PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF519	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.092	SUPFAM:SSF52743	UniParc:UPI0002107FD5
ArrayExpress:VIT_13s0019g02620	EnsemblPlantsGene:VIT_13s0019g02620	EnsemblPlants:VIT_13s0019g02620.t01	RefSeq:XP_002277182	RefSeq:XP_002277182.2	SEG:seg

Description

No Description!

Coordinates

chr13:+:3880920..3883469

Molecular Weight (calculated)

67776.4 Da

IEP (calculated)

4.453

GRAVY (calculated)

-0.004

Length

646 amino acids

Sequence
(BLAST)

001: MDGVVSVFPN GMKKLLTTRS WDFIGFPMEA NRTTTESDII VGMLDTGIWP ESASFSDEGF GPPPTKWKGT CQTSSNFTCN NKIIGARYYR SNGKVPPEDF
101: ASPRDSEGHG THTASTAAGN VVSGASLLGL GAGTARGGAP SSRIAVYKIC WAGGCPYADI LAAFDDAIAD GVDIISLSVG GFFPRDYFED PIAIGAFHSM
201: KNGILTSNSA GNSGPDPASI TNFSPWSLSV AASVIDRKFL TALHLGNNMT YEGELPLNTF EMNDMVPLIY GGDAPNTSAG SDASYSRYCY EGSLNMSLVT
301: GKIVLCDALS DGVGAMSAGA VGTVMPSDGY TDLSFAFPLP TSCLDSNYTS DVHEYINSTS TPTANIQKTT EAKNELAPFV VWFSSRGPNP ITRDILSPDI
401: AAPGVNILAA WTEASSLTGV PGDTRVVPYN IISGTSMACP HASGAAAYVK SFHPTWSPAA IKSALMTTAS PMSAERNTDL EFAYGAGQLN PLQAANPGLV
501: YDVGEADYVK FLCGQGYNDT KLQLVTGENI TCSAATNGTV WDLNYPSFAV STEHGAGVTR TFTRTVTNVG SPVSTYKAIV VGPPELSIQV EPGVLSFKSL
601: GETQTFTVTV GVAALSNPVI SGSLVWDDGV YKARSPIVAY VYDSSV

Best Arabidopsis Sequence Match ( AT5G59090.1 )
(BLAST)

001: MANLAASTCL YSWLLVLLLS SVSAIIDEDT QVYIVYMGSL SSRADYIPTS DHMSILQQVT GESSIEGRLV RSYKRSFNGF AARLTESERT LIAEIEGVVS
101: VFPNKILQLH TTTSWDFMGV KEGKNTKRNL AIESDTIIGV IDTGIWPESK SFSDKGFGPP PKKWKGVCSG GKNFTCNNKL IGARDYTSEG TRDTSGHGTH
201: TASTAAGNAV KDTSFFGIGN GTVRGGVPAS RIAAYKVCTD SGCSSEALLS SFDDAIADGV DLITISIGFQ FPSIFEDDPI AIGAFHAMAK GILTVSSAGN
301: SGPKPTTVSH VAPWIFTVAA STTNRGFITK VVLGNGKTLA GRSVNAFDMK GKKYPLVYGK SAASSACDAK TAALCAPACL NKSRVKGKIL VCGGPSGYKI
401: AKSVGAIAII DKSPRPDVAF THHLPASGLK AKDFKSLVSY IESQDSPQAA VLKTETIFNR TSPVIASFSS RGPNTIAVDI LKPDITAPGV EILAAFSPNG
501: EPSEDDTRRV KYSVFSGTSM ACPHVAGVAA YVKTFYPRWS PSMIQSAIMT TAWPVKAKGR GIASTEFAYG AGHVDPMAAL NPGLVYELDK ADHIAFLCGM
601: NYTSKTLKII SGDTVKCSKK NKILPRNLNY PSMSAKLSGT DSTFSVTFNR TLTNVGTPNS TYKSKVVAGH GSKLSIKVTP SVLYFKTVNE KQSFSVTVTG
701: SDVDSEVPSS ANLIWSDGTH NVRSPIVVYI MVVDEA

Arabidopsis Description

SBT4.12Subtilisin-like protease SBT4.12 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7D2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.