Factsheet for VIT_13s0019g02560.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g02600.t01	Wine grape	cytosol	70.59	75.69
VIT_13s0019g02620.t01	Wine grape	cytosol	68.29	73.68
VIT_13s0019g02610.t01	Wine grape	cytosol	70.88	72.75
VIT_13s0019g02640.t01	Wine grape	cytosol	65.28	71.2
VIT_13s0019g02580.t01	Wine grape	plastid	71.45	70.94
PGSC0003DMT400091877	Potato	cytosol	34.86	66.39
Solyc03g079890.1.1	Tomato	cytosol	56.67	61.72
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	65.85	61.04
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	65.14	60.86
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	67.29	59.59
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	53.95	56.54
VIT_02s0025g04600.t01	Wine grape	cytosol	58.68	55.87
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.36	53.12
VIT_06s0004g04830.t01	Wine grape	cytosol	53.08	52.63
VIT_06s0004g05620.t01	Wine grape	cytosol	24.96	52.41
VIT_16s0022g02460.t01	Wine grape	cytosol	48.78	52.39
VIT_16s0100g00060.t01	Wine grape	nucleus	55.24	51.27
VIT_06s0009g01220.t01	Wine grape	cytosol	50.22	50.14
VIT_06s0004g05590.t01	Wine grape	cytosol	42.04	49.83
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	50.5	49.37
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	49.78	49.01
VIT_13s0019g02480.t01	Wine grape	nucleus	69.01	48.15
VIT_06s0004g05630.t01	Wine grape	cytosol	50.5	48.09
VIT_08s0007g03650.t01	Wine grape	cytosol	48.35	47.67
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	49.5	46.88
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	44.19	42.48
VIT_02s0025g02860.t01	Wine grape	cytosol	24.53	42.12
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	44.76	40.57
VIT_13s0047g00200.t01	Wine grape	cytosol	43.04	40.49
VIT_02s0025g02880.t01	Wine grape	cytosol	42.04	39.76
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	44.05	39.46
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	42.75	39.06
VIT_18s0001g14870.t01	Wine grape	extracellular	41.46	38.9
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	38.74	36.83
VIT_03s0038g00470.t01	Wine grape	plastid	42.47	36.77
VIT_02s0025g02850.t01	Wine grape	mitochondrion	40.6	36.1
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	39.6	35.75
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	53.37	34.25
VIT_13s0019g02590.t01	Wine grape	cytosol	66.57	33.89
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	38.59	33.84
VIT_13s0019g02490.t01	Wine grape	extracellular	65.42	30.71
VIT_15s0048g01200.t01	Wine grape	plasma membrane	48.92	22.09

Protein Annotations

EntrezGene:100258131	wikigene:100258131	MapMan:19.4.2.1.4	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	ProteinID:CBI31596	ProteinID:CBI31596.3	UniProt:D7TLK9	EMBL:FN595998	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100258131
wikigene:LOC100258131	PFAM:PF00082	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF519	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
MEROPS:S08.092	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI00015C952B	ArrayExpress:VIT_13s0019g02560
EnsemblPlantsGene:VIT_13s0019g02560	EnsemblPlants:VIT_13s0019g02560.t01	RefSeq:XP_002281887	RefSeq:XP_002281887.2	RefSeq:XP_019079584.1	SEG:seg

Description

No Description!

Coordinates

chr13:+:3804813..3808263

Molecular Weight (calculated)

74239.8 Da

IEP (calculated)

7.382

GRAVY (calculated)

-0.118

Length

697 amino acids

Sequence
(BLAST)

001: MGDLPKGDIS ASTLHTNMLQ QVFGSRASEY LLHSYQRSFN GFVAKLTMEE KKKLSGIEGV VSVFPNGKKQ LHTTRSWDFM GFPQKVKRTT TESDIIIGML
101: DTGIWPESAS FSDEGFGPQP SKWKGTCQTS SNFTCNNKII GARYYRTDGK LGPTDIKSPR DSLGHGTHTA STAAGRMVRG ASLLGLGSGA ARGGVPSARI
201: AVYKICWHDG CPDADILAAF DDAIADGVDI ISLSVGGYDP YDYFEDSIAI GAFHSMKNGI LTSNSAGNTG PDPATITNFS PWSLSVAAST IDRKFVTKVK
301: LGNNKVYEGV SVNTFEMDDM YPIIYGGDAP NTTGGYDSSY SRYCYEDSLD KSLVDGKIVL CDWLTSGKAA IAAGAVGTVM QDGGYSDSAY IYALPASYLD
401: PRDGGKVHHY LNSTSKPMAI IQKSVEVKDE LAPFVVSFSS RGPNPITSDI LKPDLTAPGV DILAAWTEAS SVTGKEGDTR VVPYSIISGT SMSCPHASAA
501: AAYIKSFHPT WSPAAIKSAL MTTAARMSVK TNTDMEFAYG AGHIDPVKAV HPGLIYDAGE ANYVNFLCGQ GYSTKHLRLI TGDKSTCSAT MNGTVWDLNY
601: PSFTISTKSG VTVTRIFTRT VTNVGSAVST YKAILAVPSG LSVKVEPSVL SFKSLGQKKT FTMTVGTAVD KGVISGSLVW DDGIHQVRSP IVAFVSS

Best Arabidopsis Sequence Match ( AT3G46840.1 )
(BLAST)

001: MTKPAVSYCL LSCIFALLVV SFASADKDDQ DKQEYIVYMG ALPARVDYMP MSHHTSILQD VTGESSIEDR LVRNYKRSFN GFAARLTKSE REILASMDEV
101: VSVFPNKKLK LQTTTSWNFM GLKESKRTKR NTIIESDTII GVIDSGIYPE SDSFSGKGFG PPPKKWKGVC KGGKNFTWNN KLIGARYYTP KLEGFPESAR
201: DYMGHGSHTA STAAGNAVKH VSFYGLGNGT ARGGVPAARI AVYKVCDPGV DGCTTDGILA AFDDAIADKV DIITISIGGD NSSPFEEDPI AIGAFHAMAK
301: GILIVNSAGN SGPEPSTVAS IAPWMFTVAA SNTNRAFVTK VVLGNGKTVG RSVNSFDLNG KKYPLVYGKS ASSSCGAASA GFCSPGCLDS KRVKGKIVLC
401: DSPQNPDEAQ AMGAIASIVR SHRTDVASIF SFPVSVLLED DYNTVLSYMN STKNPKAAVL KSETIFNQRA PVVASYFSRG PNTIIPDILK PDITAPGSEI
501: VAAYSPDAPP SISDTRRVKY SVDTGTSMSC PHVAGVAAYL KSFHPRWSPS MIQSAIMTTA WPMNASTSPF NELAEFAYGA GHVDPITAIH PGLVYEANKS
601: DHIAFLCGLN YTAKNLRLIS GDSSSCTKEQ TKSLPRNLNY PSMTAQVSAA KPFKVIFRRT VTNVGRPNAT YKAKVVGSKL KVKVVPAVLS LKSLYEKKSF
701: TVTASGAGPK AENLVSAQLI WSDGVHFVRS PIVVYATN

Arabidopsis Description

SBT4.5Subtilisin-like protease SBT4.5 [Source:UniProtKB/Swiss-Prot;Acc:F4JA91]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.