Factsheet for VIT_13s0019g02640.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g02620.t01	Wine grape	cytosol	69.33	68.58
VIT_13s0019g02560.t01	Wine grape	cytosol	71.2	65.28
VIT_13s0019g02600.t01	Wine grape	cytosol	66.2	65.08
VIT_13s0019g02610.t01	Wine grape	cytosol	68.08	64.06
VIT_13s0019g02580.t01	Wine grape	plastid	66.2	60.26
VIT_13s0019g02530.t01	Wine grape	extracellular, vacuole	63.38	54.29
VIT_13s0019g02540.t01	Wine grape	extracellular, plasma membrane	63.38	53.86
Solyc03g079890.1.1	Tomato	cytosol	52.27	52.19
VIT_13s0019g02550.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	64.16	52.1
PGSC0003DMT400091877	Potato	cytosol	28.8	50.27
VIT_06s0004g05590.t01	Wine grape	cytosol	46.01	50.0
VIT_06s0004g05620.t01	Wine grape	cytosol	25.82	49.7
VIT_16s0100g00030.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.49	48.81
VIT_16s0022g02420.t01	Wine grape	cytosol, nucleus, plastid	50.55	48.57
VIT_16s0022g02460.t01	Wine grape	cytosol	49.3	48.54
VIT_02s0025g04600.t01	Wine grape	cytosol	55.24	48.22
VIT_06s0009g01220.t01	Wine grape	cytosol	51.49	47.13
VIT_06s0004g04830.t01	Wine grape	cytosol	50.7	46.09
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	51.33	46.0
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	50.39	45.48
VIT_16s0100g00060.t01	Wine grape	nucleus	52.9	45.01
VIT_06s0004g05630.t01	Wine grape	cytosol	50.55	44.13
VIT_13s0019g02480.t01	Wine grape	nucleus	67.14	42.94
VIT_08s0007g03650.t01	Wine grape	cytosol	46.95	42.43
VIT_15s0048g01210.t01	Wine grape	extracellular, vacuole	48.2	41.85
VIT_02s0025g02860.t01	Wine grape	cytosol	24.57	38.67
VIT_06s0080g00150.t01	Wine grape	cytosol, nucleus, plastid	43.35	38.21
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	43.35	36.3
VIT_13s0047g00200.t01	Wine grape	cytosol	41.94	36.17
VIT_02s0025g02880.t01	Wine grape	cytosol	41.63	36.09
VIT_12s0057g01450.t01	Wine grape	extracellular, vacuole	43.35	36.02
VIT_10s0003g02170.t01	Wine grape	extracellular, plasma membrane	43.51	35.73
VIT_18s0001g14870.t01	Wine grape	extracellular	41.31	35.53
VIT_03s0038g00470.t01	Wine grape	plastid	43.51	34.53
VIT_16s0098g01160.t01	Wine grape	cytoskeleton, cytosol, nucleus	39.28	34.24
VIT_06s0004g00210.t01	Wine grape	extracellular, plasma membrane, vacuole	40.38	33.42
VIT_02s0025g02850.t01	Wine grape	mitochondrion	40.22	32.78
VIT_13s0019g02590.t01	Wine grape	cytosol	67.45	31.48
VIT_16s0098g00950.t01	Wine grape	extracellular, vacuole	38.97	31.32
VIT_16s0022g02450.t01	Wine grape	cytoskeleton, cytosol, peroxisome	53.21	31.31
VIT_13s0019g02490.t01	Wine grape	extracellular	63.54	27.34
VIT_15s0048g01200.t01	Wine grape	plasma membrane	48.04	19.88

Protein Annotations

EntrezGene:100247847	wikigene:100247847	MapMan:19.4.2.1.4	Gene3D:2.60.40.2310	Gene3D:3.40.50.200	Gene3D:3.50.30.30
ProteinID:CCB56289	ProteinID:CCB56289.1	UniProt:F6HNS0	EMBL:FN595998	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	EntrezGene:LOC100247847	wikigene:LOC100247847	PFAM:PF00082
PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF519	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.092	SUPFAM:SSF52743	TIGR:TC70407
UniParc:UPI0002107FD3	ArrayExpress:VIT_13s0019g02640	EnsemblPlantsGene:VIT_13s0019g02640	EnsemblPlants:VIT_13s0019g02640.t01	unigene:Vvi.14627	RefSeq:XP_002277115
RefSeq:XP_002277115.2	RefSeq:XP_019079455.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:+:3902102..3904783

Molecular Weight (calculated)

68560.6 Da

IEP (calculated)

5.731

GRAVY (calculated)

-0.115

Length

639 amino acids

Sequence
(BLAST)

001: MEGIVSVFPN EKMQLFTTRS WDFIGFPQDV ERTTTESDII VGIIDSGIWP ESASFNAKGF SPPPRKWKGT CQTSSNFTSC NNKIIGARYY HTGAEVEPNE
101: YDSPRDSDGH GTHTASIVAG GLVSGASLLG FGSGTARGGV PSARIAVYKV CWSKGCYSAD VLAAFDDAIA DGVDIISVSL GGYSPNYFEN PIAIGAFHAL
201: KNGILTSTAV GNYGHNRATI TNLWPWSLSV AASTIDRKFV TKVQLGNNQV YEGVSINTFE MNDMYPIIYG GDAQNTTGGN SEYSSLCDKN SLNKSLVNGK
301: IVLCDALNWG EEATTAGAVG MIMRDGALKD FSLSFSLPAS YMDWSNGTEL DQYLNSTRPT AKINRSVEVK DELAPFIVSF SSRGPNLITR DILKPDLSAP
401: GVNILAAWSE ASTVTGKEWD TRVVPYNIMS GTSMACPHAS GAAAYIKSFH PTWSPSAIKS ALMTTASPMR GEINTDLEFS YGSGQVDPVK AANPGLVYDA
501: GETDYIKFLC GEGYGNAKLQ LITGDNTSCS ADTNGTVWAL NYPSFAVSTK YKVSITRNFT RTVTNVGTPA STYKANVTVP PRLCVQVEPS ILSFKSLGQK
601: KTFSVTVRVP ALDTAIISGS LVWNDGVYQV RSPIVAYLY

Best Arabidopsis Sequence Match ( AT3G46850.1 )
(BLAST)

001: MATAVSYCLL SCIFALLVVS FASAGKDDQD KQVYIVYMGA LPSRVDYMPM SHHTSILQDV TGESSIQDRL VRNYKRSFNG FAARLTESER EILASMDEVV
101: SVFPSKNLNL QTTTSWNFMG LKEGKRTKRN PLIESDTIIG VIDSGIYPES DSFSGKGFGP PPKKWKGVCK GGTNFTCNNK LIGARYYTPK LEGFPESARD
201: NTGHGSHTAS IAAGNAVKHV SFYGLGNGTV RGGVPAARIA VYKVCDPGVI RCTSDGILAA FDDAIADKVD IITVSLGADA VGTFEEDTLA IGAFHAMAKG
301: ILTVNGAGNN GPERRTIVSM APWLFTVAAS NMNRAFITKV VLGNGKTIVG RSVNSFDLNG KKYPLVYGKS ASSRCDASSA GFCSPGCLDS KRVKGKIVLC
401: DTQRNPGEAQ AMGAVASIVR NPYEDAASVF SFPVSVLSED DYNIVLSYVN STKNPKAAVL KSETIFNQKA PVVASYSSRG PNPLIHDILK PDITAPGSEI
501: LAAYSPYVPP SESDTRHVKY TVISGTSMSC PHVAGVAAYI KTFHPLWSPS MIQSAIMTTA WPMNASTSPS NELAEFAYGA GHVDPIAAIH PGLVYEANKS
601: DHITFLCGFN YTGKKLRLIS GDSSSCTKEQ TKSLTRNLNY PSMSAQVSGT KPFKVTFRRT VTNVGRPNAT YKAKVVGSKL KVKVVPAVLS LKSLYEKKSF
701: TVTVSGAGPK AENLVSAQLI WSDGVHFVRS PIVVYA

Arabidopsis Description

SBT4.6Subtilisin-like protease SBT4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9STF7]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.