CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 5
vacuole 6
golgi 5
extracellular 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39376	Soybean	extracellular, plasma membrane	93.83	93.71
KRH76486	Soybean	nucleus	79.92	79.82
KRH28969	Soybean	extracellular, plasma membrane	79.53	79.53
VIT_04s0044g01970.t01	Wine grape	extracellular, plasma membrane	75.46	75.36
PGSC0003DMT400024344	Potato	cytosol	70.08	73.55
Solyc02g068280.2.1	Tomato	nucleus	70.73	71.2
GSMUA_Achr1P27960_001	Banana	extracellular, plasma membrane	65.49	65.4
Os06t0624100-00	Rice	cytosol	59.58	61.27
KXG20396	Sorghum	endoplasmic reticulum, extracellular	61.29	60.65
Zm00001d036788_P003	Maize	vacuole	58.92	58.54
KRH15031	Soybean	cytosol, peroxisome	11.94	46.91
KRH30453	Soybean	extracellular, plasma membrane	42.78	43.01
KRH25196	Soybean	extracellular, plasma membrane	42.52	42.41
KRH61015	Soybean	extracellular	40.68	40.31
KRH61013	Soybean	nucleus	40.68	40.26
KRH33384	Soybean	endoplasmic reticulum, extracellular	38.58	40.05
KRH15035	Soybean	extracellular, plasma membrane	38.45	40.03
KRH29358	Soybean	extracellular, vacuole	41.08	40.03
KRH51678	Soybean	extracellular, plasma membrane	40.03	39.82
KRH51679	Soybean	extracellular, vacuole	39.9	39.48
KRH58831	Soybean	extracellular	41.08	39.47
KRH33383	Soybean	extracellular	38.06	39.4
KRH20579	Soybean	nucleus	40.03	39.2
KRH13238	Soybean	endoplasmic reticulum, extracellular, plasma membrane	39.76	39.0
KRH61012	Soybean	mitochondrion, plastid	22.57	38.65
KRH65185	Soybean	cytosol	12.86	38.58
KRG97819	Soybean	extracellular, plasma membrane	32.15	38.46
KRH15033	Soybean	extracellular, plasma membrane	37.01	38.26
KRH31054	Soybean	nucleus	36.88	38.08
KRH15024	Soybean	nucleus	36.61	37.91
KRH32681	Soybean	extracellular, plasma membrane	35.96	37.43
KRH40552	Soybean	extracellular, golgi	36.35	37.03
KRH67890	Soybean	extracellular, plasma membrane	36.22	37.0
KRH61014	Soybean	cytosol, vacuole	18.64	36.04
KRH15027	Soybean	extracellular	34.51	35.73
KRH25195	Soybean	plasma membrane	30.84	35.61
KRH73105	Soybean	nucleus	36.61	35.01

Protein Annotations

EntrezGene:100819201	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1
EMBL:ACUP02010120	EnsemblPlantsGene:GLYMA_16G116000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:I1MMW0	InterPro:IPR036852
InterPro:IPR037045	EnsemblPlants:KRH07873	ProteinID:KRH07873	ProteinID:KRH07873.1	InterPro:PA_domain	PFAM:PF00082
PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF382
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000233B62A	SEG:seg

Description

hypothetical protein

Coordinates

chr16:+:25801793..25807645

Molecular Weight (calculated)

81510.9 Da

IEP (calculated)

9.587

GRAVY (calculated)

-0.101

Length

762 amino acids

Sequence
(BLAST)

001: MSSSGYTTSS ALFFLFLTVL AAKVSFCFST KVYVVYMGSK SGEHPDDILK ENHQILASVH SGSIEQAQAS HIYTYRHGFR GFAAKLSDEQ ASQISKMPGV
101: VSVFPNSKRK LHTTHSWDFM GLLDDQTMET LGYSIRNQEN IIIGFIDTGI WPESPSFSDT DMPAVPPGWK GQCQSGEGFN SSSCNRKVIG ARYYRSGYEA
201: AEGDSDAKKS FRSARDSTGH GSHTASIAAG RFVANMNYKG LASGGARGGA PMARIAVYKT CWDSGCYDVD LLAAFDDAIR DGVHILSLSL GAESPQGDYF
301: SDAISVGSFH AVSRGVLVVA SAGNEGSAGS ATNLAPWMLT VAASSTDRDF TSDIMLGNGA KIMGESLSLF EMNASTRIIS ASAANGGYFT PYQSSYCLES
401: SLNKTKSKGK VLVCRHAESS TESKVEKSKI VKAAGGVGMI LIDETDQDVA IPFVIPSAIV GKKTGEKILS YLRTTRKPES RIFGAKTVLG AHPAPRVAAF
501: SSKGPNALNP EILKPDVTAP GLNILAAWSP AAGNMFNILS GTSMACPHVT GIATLVKAVH PSWSPSAIKS AILTTATILD KHHRPIIADP EQRRANAFDY
601: GSGFVNPARV LDPGLIYDLK PADFVAFLCS LGYDPRSLHQ VTRDNSTCDR AFSTASDLNY PSISVPNLKD NFSVTRIVTN VGKAKSVYKA VVSPPPGVRV
701: SVIPNRLIFS RIGQKINFTV NFKVTAPSKG YAFGLLSWRN RRSQVTSPLV VRVAPGKNGL VR

Best Arabidopsis Sequence Match ( AT1G32940.1 )
(BLAST)

001: MRNCRVLLVL VLSLVIVLNV VRASDESKVH IVYLGEKQHD DPEFVSESHH QMLSSLLGSK VDAHESMVYS YRHGFSGFAA KLTESQAKKL ADSPEVVHVM
101: ADSFYELATT RTWDYLGLSV ANPNNLLNDT NMGDQVIIGF IDTGVWPESE SFNDNGVGPI PSHWKGGCES GEKFISTNCN RKLIGAKYFI NGFLAENEGF
201: NTTESRDYIS ARDFIGHGTH TASIAGGSFV PNISYKGLAG GNLRGGAPRA RIAIYKACWY VDQLGAVACS SSDILKAMDE SMHDGVDVLS LSLGAQIPLY
301: PETDLRDRIA TGAFHAVAKG IIVVCAGGNS GPAAQTVLNT APWIITVAAT TLDRSFPTPI TLGNRKVILG QALYTGQELG FTSLVYPENA GFTNETFSGV
401: CERLNLNPNR TMAGKVVLCF TTNTLFTAVS RAASYVKAAG GLGVIIARNP GYNLTPCRDD FPCVAIDYEL GTDVLLYIRS TRSPVVKIQP SRTLVGQPVG
501: TKVATFSSRG PNSISPAILK PDIGAPGVSI LAATSPDSNS SVGGFDILAG TSMAAPVVAG VVALLKALHP NWSPAAFRSA IVTTAWRTDP FGEQIFAEGS
601: SRKVADPFDY GGGIVNPEKA ADPGLIYDMG PRDYILYLCS AGYNDSSITQ LVGNVTVCST PKTSVLDVNL PSITIPDLKD EVTLTRTVTN VGTVDSVYKV
701: VVEPPLGIQV VVAPETLVFN SKTKNVSFTV RVSTTHKINT GFYFGNLIWT DSMHNVTIPV SVRTQILQNY YDEN

Arabidopsis Description

SBT3.5Subtilisin-like protease SBT3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAP7]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.