CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 6
vacuole 5
golgi 5
extracellular 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13238	Soybean	endoplasmic reticulum, extracellular, plasma membrane	92.42	92.54
VIT_13s0047g00200.t01	Wine grape	cytosol	65.3	68.56
PGSC0003DMT400008489	Potato	cytosol	34.06	63.7
GSMUA_Achr3P09370_001	Banana	cytosol	54.76	62.46
GSMUA_Achr5P07800_001	Banana	cytosol	56.3	61.86
Solyc01g096560.1.1	Tomato	cytosol	55.78	58.97
TraesCS3D01G194100.1	Wheat	cytosol, nucleus, plastid	54.88	58.49
CDX77071	Canola	extracellular	56.68	58.03
EES02777	Sorghum	extracellular, vacuole	58.61	57.72
HORVU3Hr1G039800.7	Barley	extracellular	47.94	57.38
Bra034327.1-P	Field mustard	nucleus	43.96	57.29
Zm00001d040466_P001	Maize	extracellular, vacuole	57.45	57.16
CDY57477	Canola	extracellular	56.94	56.72
TraesCS3A01G191500.1	Wheat	extracellular, plasma membrane	56.04	55.75
TraesCS7A01G037500.1	Wheat	cytosol, extracellular, nucleus	44.09	55.68
TraesCS3B01G219500.3	Wheat	extracellular, vacuole	56.17	55.53
Os01t0278950-00	Rice	extracellular	56.43	55.22
KRH61012	Soybean	mitochondrion, plastid	27.64	48.31
KRH15031	Soybean	cytosol, peroxisome	11.95	47.94
KRH51678	Soybean	extracellular, plasma membrane	47.04	47.78
KRH61013	Soybean	nucleus	47.17	47.66
KRH61014	Soybean	cytosol, vacuole	23.52	46.45
KRH61015	Soybean	extracellular	45.24	45.77
KRH51679	Soybean	extracellular, vacuole	44.09	44.55
KRH33383	Soybean	extracellular	40.49	42.8
KRG97819	Soybean	extracellular, plasma membrane	34.83	42.54
KRH33384	Soybean	endoplasmic reticulum, extracellular	39.59	41.96
KRH32681	Soybean	extracellular, plasma membrane	39.33	41.8
KRH67890	Soybean	extracellular, plasma membrane	39.97	41.69
KRH15035	Soybean	extracellular, plasma membrane	38.95	41.39
KRH31054	Soybean	nucleus	38.43	40.51
KRH28969	Soybean	extracellular, plasma membrane	39.33	40.16
KRH76486	Soybean	nucleus	39.33	40.1
KRH15033	Soybean	extracellular, plasma membrane	37.92	40.03
KRH07873	Soybean	nucleus	39.2	40.03
KRH39376	Soybean	extracellular, plasma membrane	39.2	39.97
KRH30453	Soybean	extracellular, plasma membrane	38.82	39.84
KRH65185	Soybean	cytosol	12.85	39.37
KRH25196	Soybean	extracellular, plasma membrane	38.43	39.14
KRH29358	Soybean	extracellular, vacuole	39.33	39.13
KRH15024	Soybean	nucleus	36.5	38.59
KRH58831	Soybean	extracellular	38.43	37.7
KRH15027	Soybean	extracellular	35.6	37.64
KRH40552	Soybean	extracellular, golgi	35.48	36.9
KRH73105	Soybean	nucleus	35.6	34.76
KRH25195	Soybean	plasma membrane	28.15	33.18

Protein Annotations

EntrezGene:100809885	MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30
EMBL:ACUP02008280	EnsemblPlantsGene:GLYMA_13G187000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538
UniProt:I1M0I4	InterPro:IPR036852	InterPro:IPR037045	EnsemblPlants:KRH20579	ProteinID:KRH20579	ProteinID:KRH20579.1
PFAM:PF00082	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF444
InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	MEROPS:S08.104
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	UniParc:UPI000233D78B	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:30060197..30072759

Molecular Weight (calculated)

83933.0 Da

IEP (calculated)

8.617

GRAVY (calculated)

-0.111

Length

778 amino acids

Sequence
(BLAST)

001: MEGLQKFLHF FFVASLLIST TAISDHTPKP YVVYMGNSSP NKIGVESQIA ESSHLQLLSL IIPSEESERI ALTHHFSHAF SGFSAMLTES EASALSGHDG
101: VVSVFPDPVL ELHTTRSWDF LESELGMKPY YSHGTPTLHK HPSTDIIIGV IDTGIWPESP SFRDEGIGEI PSKWKGVCME GRDFKKSNCN RKLIGARYYK
201: IQATSGDNQT HIEAAKGSPR DTVGHGTHTA SIAAGVHVNN ASYFGLAKGT ARGGSPSTRI AAYKTCSDEG CSGATILKAI DDAVKDGVDI ISISIGLSSL
301: FQSDFLSDPI AIGAFHAEQK GVLVVCSAGN DGPDPFTVVN SAPWIFTIAA SNIDRNFQST IVLGNGKYLQ GTGINFSNLT HSKMHRLVFG EQVAAKFVPA
401: SEARNCFPGS LDFNKTAGNI VVCVNDDPSV SRRIKKLVVQ DARAVGIILI NENNKDAPFD AGVFPFTQVG NLEGHQILKY INSTKNPTAT ILPTTEVARS
501: KPSPIVASFS SRGPSSLTEN ILKPDVMAPG VGILAAVIPK SKEPGSVPIG KKPSLYAIKS GTSMACPHVT GAAAFIKSVH KKWSSSMIKS ALMTTATNYN
601: NMRKPLTNSS NSIAGPHEMG VGEINPLRAL NPGLVFETDV EDYLRFLCYF GYSQKIIRSI SETNFNCPKN SSEDLISSVN YPSISISTLK RQQKAKVITR
701: TVTNVGYLNA TYTAKVRAPQ GLVVEVIPNK LVFSEGVQRM TYKVSFYGKE AHGGYNFGSL TWLDGHHYVH TVFAVKVE

Best Arabidopsis Sequence Match ( AT1G20150.1 )
(BLAST)

001: MMRCLTITIM FFMFFFLSVI QKCKSETSKS GDYIIYMGAA SSDGSTDNDH VELLSSLLQR SGKTPMHRYK HGFSGFAAHL SEDEAHLIAK QPGVLSVFPD
101: QMLQLHTTRS WDFLVQESYQ RDTYFTEMNY EQESEMHEGD TIIGFLDSGI WPEAQSFNDR HMGPVPEKWK GTCMRGKKTQ PDSFRCNRKL IGARYYNSSF
201: FLDPDYETPR DFLGHGTHVA SIAAGQIIAN ASYYGLASGI MRGGSPSSRI AMYRACSLLG CRGSSILAAF DDAIADGVDV ISISMGLWPD NLLEDPLSIG
301: SFHAVERGIT VVCSVGNSGP SSQSVFNAAP WMITVAASTI DRGFESNILL GGDENRLIEG FGINIANIDK TQAYPLIHAR SAKKIDANEE AARNCAPDTL
401: DQTIVKGKIV VCDSDLDNQV IQWKSDEVKR LGGIGMVLVD DESMDLSFID PSFLVTIIKP EDGIQIMSYI NSTREPIATI MPTRSRTGHM LAPSIPSFSS
501: RGPYLLTRSI LKPDIAAPGV NILASWLVGD RNAAPEGKPP PLFNIESGTS MSCPHVSGIA ARLKSRYPSW SPAAIRSAIM TTAVQMTNTG SHITTETGEK
601: ATPYDFGAGQ VTIFGPSSPG LIYETNHMDY LNFLGYYGFT SDQIKKISNR IPQGFACPEQ SNRGDISNIN YPSISISNFN GKESRRVSRT VTNVASRLIG
701: DEDTVYTVSI DAPEGLLVRV IPRRLHFRKI GDKLSYQVIF SSTTTILKDD AFGSITWSNG MYNVRSPFVV TSKDDNDSER

Arabidopsis Description

SBT5.1Subtilisin-like protease SBT5.1 [Source:UniProtKB/Swiss-Prot;Acc:F4HSQ2]
SUBAcon: [golgi,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.