Factsheet for PGSC0003DMT400008489

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096560.1.1	Tomato	cytosol	92.55	52.31
HORVU3Hr1G039800.7	Barley	extracellular	57.45	36.77
TraesCS7A01G037500.1	Wheat	cytosol, extracellular, nucleus	54.33	36.69
VIT_13s0047g00200.t01	Wine grape	cytosol	64.9	36.44
Bra034327.1-P	Field mustard	nucleus	52.16	36.35
GSMUA_Achr5P07800_001	Banana	cytosol	60.82	35.73
KRH20579	Soybean	nucleus	63.7	34.06
KRH13238	Soybean	endoplasmic reticulum, extracellular, plasma membrane	63.22	33.85
GSMUA_Achr3P09370_001	Banana	cytosol	55.29	33.72
TraesCS3D01G194100.1	Wheat	cytosol, nucleus, plastid	57.45	32.74
PGSC0003DMT400091877	Potato	cytosol	28.61	32.51
Zm00001d040466_P001	Maize	extracellular, vacuole	59.62	31.71
EES02777	Sorghum	extracellular, vacuole	59.62	31.39
Os01t0278950-00	Rice	extracellular	58.41	30.57
TraesCS3A01G191500.1	Wheat	extracellular, plasma membrane	57.45	30.56
TraesCS3B01G219500.3	Wheat	extracellular, vacuole	56.49	29.86
CDX77071	Canola	extracellular	54.09	29.61
PGSC0003DMT400001575	Potato	cytosol	33.89	29.19
CDY57477	Canola	extracellular	54.33	28.94
PGSC0003DMT400055014	Potato	cytosol, nucleus, plastid	49.28	27.33
PGSC0003DMT400025767	Potato	extracellular, plasma membrane, vacuole	48.08	25.87
PGSC0003DMT400024344	Potato	cytosol	44.71	25.62
PGSC0003DMT400064917	Potato	cytoskeleton, cytosol, peroxisome	34.13	25.22
PGSC0003DMT400023132	Potato	extracellular	36.3	24.43
PGSC0003DMT400047862	Potato	cytosol, extracellular	37.02	23.4
PGSC0003DMT400000381	Potato	extracellular, plasma membrane	41.59	23.19
PGSC0003DMT400049911	Potato	mitochondrion	29.09	20.54

Protein Annotations

Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	UniProt:M0ZUM4	PFAM:PF00082	EnsemblPlantsGene:PGSC0003DMG402003285	PGSC:PGSC0003DMG402003285
EnsemblPlants:PGSC0003DMT400008489	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF444	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	MEROPS:S08.104	SUPFAM:SSF52743	UniParc:UPI00029501F1

Description

Xylem serine proteinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG402003285]

Coordinates

chr1:+:74342683..74344901

Molecular Weight (calculated)

44273.7 Da

IEP (calculated)

8.975

GRAVY (calculated)

-0.094

Length

416 amino acids

Sequence
(BLAST)

001: MEGFDFHKSN CNRKLIGARF YDIEDQDSNI TKLPKNTTKP NGTPRDRVGH GTHTASIAAG AFVPNATYYG LASGIARGGS PSSRIATYKA CSEGYCQGSA
101: ILKAIDDAIK DGVDIISISI GRSFVFQTDF KDDPIAIGAF HAAERGIGVV CSSGNEGPDP YTVTNSAPWI FTVAASTIDR KFQSNVALGN NVTLKGTGIS
201: FYTSGHAKTY PLAFGENVHF HPSLTSQARN CMPGSLDAKK VAGKIIVCMN DGWSISRLIK KLVVQDANAK GVILIDEQEK SSPFDSGNFP FAEFGKIAGA
301: KILQYINSSQ NPHATIFPAN EIRRFKPAPV VADFSSRGPA TLTENILKPD ITAPGVGILS AMIPNTEKGS SLFGITSGTS MACPHVSGAM AFIKSIHPTW
401: TFPMIKSAIM TTGITY

Best Arabidopsis Sequence Match ( AT1G20150.1 )
(BLAST)

001: MMRCLTITIM FFMFFFLSVI QKCKSETSKS GDYIIYMGAA SSDGSTDNDH VELLSSLLQR SGKTPMHRYK HGFSGFAAHL SEDEAHLIAK QPGVLSVFPD
101: QMLQLHTTRS WDFLVQESYQ RDTYFTEMNY EQESEMHEGD TIIGFLDSGI WPEAQSFNDR HMGPVPEKWK GTCMRGKKTQ PDSFRCNRKL IGARYYNSSF
201: FLDPDYETPR DFLGHGTHVA SIAAGQIIAN ASYYGLASGI MRGGSPSSRI AMYRACSLLG CRGSSILAAF DDAIADGVDV ISISMGLWPD NLLEDPLSIG
301: SFHAVERGIT VVCSVGNSGP SSQSVFNAAP WMITVAASTI DRGFESNILL GGDENRLIEG FGINIANIDK TQAYPLIHAR SAKKIDANEE AARNCAPDTL
401: DQTIVKGKIV VCDSDLDNQV IQWKSDEVKR LGGIGMVLVD DESMDLSFID PSFLVTIIKP EDGIQIMSYI NSTREPIATI MPTRSRTGHM LAPSIPSFSS
501: RGPYLLTRSI LKPDIAAPGV NILASWLVGD RNAAPEGKPP PLFNIESGTS MSCPHVSGIA ARLKSRYPSW SPAAIRSAIM TTAVQMTNTG SHITTETGEK
601: ATPYDFGAGQ VTIFGPSSPG LIYETNHMDY LNFLGYYGFT SDQIKKISNR IPQGFACPEQ SNRGDISNIN YPSISISNFN GKESRRVSRT VTNVASRLIG
701: DEDTVYTVSI DAPEGLLVRV IPRRLHFRKI GDKLSYQVIF SSTTTILKDD AFGSITWSNG MYNVRSPFVV TSKDDNDSER

Arabidopsis Description

SBT5.1Subtilisin-like protease SBT5.1 [Source:UniProtKB/Swiss-Prot;Acc:F4HSQ2]
SUBAcon: [golgi,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.