Factsheet for PGSC0003DMT400049911

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
vacuole 1
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064917	Potato	cytoskeleton, cytosol, peroxisome	50.59	52.93
PGSC0003DMT400047862	Potato	cytosol, extracellular	58.74	52.58
PGSC0003DMT400001575	Potato	cytosol	24.11	29.4
PGSC0003DMT400008489	Potato	cytosol	20.54	29.09
KRH29358	Soybean	extracellular, vacuole	35.14	26.47
EER97086	Sorghum	extracellular	33.79	26.01
PGSC0003DMT400024344	Potato	cytosol	31.75	25.76
TraesCS5A01G318800.1	Wheat	extracellular	33.28	25.59
TraesCS5B01G319300.2	Wheat	extracellular	33.45	25.39
Zm00001d006205_P001	Maize	extracellular	33.11	25.36
TraesCS5D01G325000.1	Wheat	extracellular	33.28	25.36
HORVU5Hr1G081390.6	Barley	endoplasmic reticulum, extracellular, plasma membrane	32.94	25.19
Zm00001d021283_P001	Maize	extracellular, plasma membrane	33.28	24.72
KRH58831	Soybean	extracellular	33.11	24.59
PGSC0003DMT400023132	Potato	extracellular	25.64	24.43
PGSC0003DMT400000381	Potato	extracellular, plasma membrane	30.22	23.86
PGSC0003DMT400091877	Potato	cytosol	14.6	23.5
PGSC0003DMT400025767	Potato	extracellular, plasma membrane, vacuole	29.54	22.51
PGSC0003DMT400055014	Potato	cytosol, nucleus, plastid	28.52	22.4

Protein Annotations

Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	UniProt:M1BPJ1	PFAM:PF00082
PFAM:PF05922	EnsemblPlantsGene:PGSC0003DMG400019397	PGSC:PGSC0003DMG400019397	EnsemblPlants:PGSC0003DMT400049911	PRINTS:PR00723	ScanProsite:PS00138
PANTHER:PTHR43806	PANTHER:PTHR43806:SF18	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI000294CF05	SEG:seg	:

Description

Cucumisin [Source:PGSC_GENE;Acc:PGSC0003DMG400019397]

Coordinates

chr10:-:5964176..5971757

Molecular Weight (calculated)

63915.3 Da

IEP (calculated)

7.806

GRAVY (calculated)

-0.201

Length

589 amino acids

Sequence
(BLAST)

001: MMMYSYRHGF SGFAAKLTNS QAKQIGELPD VVRVIKNPLY TTHTSRSWDF LGLSRNSPNN LLNKTNQGDG MIIGVLDSEM MAVYCSGADI LAGVDDAIKD
101: GVDIISASIG DIFINIAEVN EESVLGIGSY HAVSHGISVI AAGGNSGPDS NTISNTAPWV ITVAASNSDR HIVTPLTLGN NNTILGDGLF REQIFGPLIT
201: FHNITKGEQV KFIANEVKGK VLLVFFQQED DILASLINLK TSGVLAIIVS IPPFDEITDY NQLFGIPIPN VYVDLEQGNQ IYDYFQRSKS NNQDPMIKLG
301: RSEILEGQEV VLKVPKFSSR GPNAFAPEIL KPDIAAPGVN ILAAVRPQKG DHGFQLMSGT SMAAPHVSGI VALLKVAHPD WSPAAIKSAL VTTAWNEDTY
401: KSEIYSEGAG DKIADPFDFG GGICNPNGAT DPGLVYDMDK NDYLNYLCSL GYSNDKMQNA TTLFSKTKNS TSSGIICPNK VPSRSLIGVK SEFGQLRKLE
501: IYARAWRKEK RGERRRKGKI RRECSSLIVN FAKDSILRGM SEIEKKNSSN SPGECLAWRA PSTPRRLGRR ACSVLETSPS NLGAGAARQ

Best Arabidopsis Sequence Match ( AT4G10520.1 )
(BLAST)

001: MSKTILFLAL FLSIVLNVQI SFVVAESKVY VVYLGEKEHD NPESVTESHH QMLWSLLGSK EAVLDSIVYS YRHGFSGFAA KLTESQAQQI SELPEVVQVI
101: PNTLYEMTTT RTWDYLGVSP GNSDSLLQKA NMGYNVIVGV IDSGVWPESE MFNDKGFGPI PSRWKGGCES GELFNASIHC NRKLIGAKYF VDGLVAEFGV
201: VNRTQNPEYL SPRDFAGHGT HVASTIGGSF LPNVSYVGLG RGTARGGAPG VHIAVYKACW SGYCSGADVL KAMDEAIHDG VDILSLSLGP SVPLFPETEH
301: TSVGAFHAVA KGIPVVIAAG NAGPTAQTIS NVAPWVLTVA ATTQDRSFPT AITLGNNITI LGQAIYGGPE LGFVGLTYPE SPLSGDCEKL SANPNSTMEG
401: KVVLCFAAST PSNAAIAAVI NAGGLGLIMA KNPTHSLTPT RKFPWVSIDF ELGTDILFYI RSTRSPIVKI QASKTLFGQS VSTKVATFSS RGPNSVSPAI
501: LKPDIAAPGV NILAAISPNS SINDGGFAMM SGTSMATPVV SGVVVLLKSL HPDWSPSAIK SAIVTTAWRT DPSGEPIFAD GSSRKLADPF DYGGGLINPE
601: KAVKPGLIYD MTTDDYVMYM CSVDYSDISI SRVLGKITVC PNPKPSVLDL NLPSITIPNL RGEVTLTRTV TNVGPVNSVY KVVIDPPTGI NVAVTPAELV
701: FDYTTTKRSF TVRVSTTHKV NTGYYFGSLT WTDNMHNVAI PVSVRTQILQ RYYDEN

Arabidopsis Description

SBT3.9Subtilisin-like protease SBT3.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSB0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.