Factsheet for PGSC0003DMT400055014

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006660.1.1	Tomato	extracellular	76.53	85.04
VIT_18s0001g14870.t01	Wine grape	extracellular	56.53	57.07
PGSC0003DMT400025767	Potato	extracellular, plasma membrane, vacuole	58.53	56.79
KRH61012	Soybean	mitochondrion, plastid	30.93	52.13
KRH51678	Soybean	extracellular, plasma membrane	50.8	49.74
PGSC0003DMT400008489	Potato	cytosol	27.33	49.28
KRH61015	Soybean	extracellular	50.27	49.02
KRH61013	Soybean	nucleus	49.73	48.44
KRH61014	Soybean	cytosol, vacuole	24.67	46.95
KRH51679	Soybean	extracellular, vacuole	47.87	46.62
AT1G20150.1	Thale cress	extracellular, golgi, vacuole	48.4	46.54
TraesCS2A01G444900.1	Wheat	extracellular, vacuole	48.0	46.39
Os09t0482660-01	Rice	extracellular	32.27	46.27
TraesCSU01G025500.1	Wheat	extracellular, vacuole	47.87	46.2
CDY01388	Canola	extracellular, plasma membrane, vacuole	47.47	45.82
GSMUA_Achr4P29490_001	Banana	cytosol, extracellular	40.93	45.55
HORVU2Hr1G102920.1	Barley	extracellular, plasma membrane	47.47	45.41
Bra012217.1-P	Field mustard	cytosol, plastid	23.87	43.13
Zm00001d019450_P001	Maize	extracellular, plasma membrane	47.47	42.63
EER98388	Sorghum	extracellular, plasma membrane	46.93	42.62
CDY67543	Canola	cytosol	47.07	39.31
PGSC0003DMT400024344	Potato	cytosol	38.0	39.26
PGSC0003DMT400001575	Potato	cytosol	25.2	39.13
PGSC0003DMT400023132	Potato	extracellular	31.6	38.35
PGSC0003DMT400091877	Potato	cytosol	18.27	37.43
PGSC0003DMT400047862	Potato	cytosol, extracellular	30.4	34.65
PGSC0003DMT400064917	Potato	cytoskeleton, cytosol, peroxisome	26.0	34.64
PGSC0003DMT400000381	Potato	extracellular, plasma membrane	34.4	34.58
PGSC0003DMT400049911	Potato	mitochondrion	22.4	28.52

Protein Annotations

MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	UniProt:M1BX82
PFAM:PF00082	PFAM:PF05922	EnsemblPlantsGene:PGSC0003DMG400021348	PGSC:PGSC0003DMG400021348	EnsemblPlants:PGSC0003DMT400055014	PRINTS:PR00723
PANTHER:PTHR10795	PANTHER:PTHR10795:SF520	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
MEROPS:S08.A22	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	UniParc:UPI000296CD99	SEG:seg

Description

Subtilisin-type protease [Source:PGSC_GENE;Acc:PGSC0003DMG400021348]

Coordinates

chr1:-:2466455..2476089

Molecular Weight (calculated)

81259.2 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.242

Length

750 amino acids

Sequence
(BLAST)

001: MGAKGSSDDH IHLMSSLTTR RKNAVVHSYK NSFSGFAARL SDDEAQSIAQ HPGVVSVFPD PVFQLHTTRS WEFLRDQYNL VHNFPYSSHS NSTSNGADTI
101: IGIFDTGIWP ESESFNDKGI GPVPSRWKGT CTRGYDFKSS SCNRKLIGAR FYDEPGEFKT PFTGTPRDHD GHGTHVAAIA AGTPVAGASY YGIAGGTAKG
201: GSPGSRIAVY RTCKPYSGCS GSDIMKAFDD AIADGVDIIN LSFGQPAGTE FEFSKNPIAI GAFHAVQKGI FVVASGGNDG PSPESVVNVA PWIFTVAATT
301: IDRNIETHIP LGGNMLIKGG GISFSDLKKS PVYPLVDSLS VKLDSEIVFD GPARDCEPDT LDERKVKGKI IVCDHLTDDF SLEVRLNEVK KKGGIGFILS
401: IPDDQLITAP KIGSFPGAVI TQGDGTKIRS YINSTRNPVA TILPTVSVDN FKPAPVVAFF SSRGPNYNTR NLLKPDIAAP GTAILAAWTA NDTEVTRSGK
501: QPPLFNIESG TSMSCAHVSA IVATLKSQNP SWSPSAIRSA IMTTAFQQSN LKSPIVNSVY GESLATPYAF GAGVATMSGP LKPGLVYETE ITDYLQFLCS
601: TGYDTSTIKL ISKTLPNDFP CPTGSSDDSV SNMNYPSIAV SLSKVRETKE VTRTLTRISD EESEYTVIIT APDVLRVEVS PKKLKFTSDR KKLSYQMTFK
701: AMSRERIFWI NNMDQCRGRI NQGSRRCHGT HKPLAELIYS MYIWKKLHIY

Best Arabidopsis Sequence Match ( AT1G20160.2 )
(BLAST)

001: MGSASSAANA NRAQILINTM FKRRANDLLH TYKHGFSGFA ARLTAEEAKV IAKKPGVVSV FPDPHFQLHT THSWDFLKYQ TSVKVDSGPP SSASDGSYDS
101: IVGILDTGIW PESESFNDKD MGPIPSRWKG TCMEAKDFKS SNCNRKIIGA RYYKNPDDDS EYYTTRDVIG HGSHVSSTIA GSAVENASYY GVASGTAKGG
201: SQNARIAMYK VCNPGGCTGS SILAAFDDAI ADGVDVLSLS LGAPAYARID LNTDPIAIGA FHAVEQGILV ICSAGNDGPD GGTVTNTAPW IMTVAANTID
301: RDFESDVVLG GNKVIKGEGI HFSNVSKSPV YPLIHGKSAK SADASEGSAR ACDSDSLDQE KVKGKIVLCE NVGGSYYASS ARDEVKSKGG TGCVFVDDRT
401: RAVASAYGSF PTTVIDSKEA AEIFSYLNST KDPVATILPT ATVEKFTPAP AVAYFSSRGP SSLTRSILKP DITAPGVSIL AAWTGNDSSI SLEGKPASQY
501: NVISGTSMAA PHVSAVASLI KSQHPTWGPS AIRSAIMTTA TQTNNDKGLI TTETGATATP YDSGAGELSS TASMQPGLVY ETTETDYLNF LCYYGYNVTT
601: IKAMSKAFPE NFTCPADSNL DLISTINYPS IGISGFKGNG SKTVTRTVTN VGEDGEAVYT VSVETPPGFN IQVTPEKLQF TKDGEKLTYQ VIVSATASLK
701: QDVFGALTWS NAKYKVRSPI VISSESSRTN

Arabidopsis Description

CRSPCO(2)-response secreted protease [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.