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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • vacuole 2
  • golgi 2
  • extracellular 1
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:golgi, plasma membrane
PProwler:mitochondrion
YLoc:vacuole
extracellular: 25047395
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G444900.1 Wheat extracellular, vacuole 78.78 53.09
TraesCSU01G025500.1 Wheat extracellular, vacuole 78.59 52.9
HORVU2Hr1G102920.1 Barley extracellular, plasma membrane 78.01 52.04
EER98388 Sorghum extracellular, plasma membrane 77.25 48.91
Zm00001d019450_P001 Maize extracellular, plasma membrane 77.25 48.38
KRH61014 Soybean cytosol, vacuole 36.14 47.97
GSMUA_Achr4P29490_001 Banana cytosol, extracellular 56.6 43.92
Bra012217.1-P Field mustard cytosol, plastid 34.61 43.61
VIT_18s0001g14870.t01 Wine grape extracellular 59.66 41.99
Os04t0127600-00 Rice cytosol, plastid 18.16 40.6
Os04t0126600-00 Rice cytosol, plastid 22.37 38.61
KRH61013 Soybean nucleus 56.6 38.44
KRH61012 Soybean mitochondrion, plastid 32.7 38.43
KRH61015 Soybean extracellular 54.11 36.8
KRH51678 Soybean extracellular, plasma membrane 53.35 36.42
PGSC0003DMT400025767 Potato extracellular, plasma membrane, vacuole 53.73 36.35
Solyc04g081810.2.1 Tomato extracellular 53.54 35.76
KRH51679 Soybean extracellular, vacuole 51.24 34.81
Os04t0121200-00 Rice cytosol, extracellular 13.96 33.8
Os01t0278950-00 Rice extracellular 50.86 33.46
AT1G20150.1 Thale cress extracellular, golgi, vacuole 48.95 32.82
Os02t0270800-00 Rice cytosol 24.47 32.65
PGSC0003DMT400055014 Potato cytosol, nucleus, plastid 46.27 32.27
CDY01388 Canola extracellular, plasma membrane, vacuole 47.23 31.79
Solyc01g006660.1.1 Tomato extracellular 40.54 31.41
Os04t0127300-01 Rice cytosol 33.46 28.88
Os06t0624100-00 Rice cytosol 39.77 28.07
Os04t0120300-00 Rice extracellular 34.03 27.3
CDY67543 Canola cytosol 46.85 27.28
Os04t0127200-02 Rice cytosol, peroxisome 33.27 26.77
Os02t0269600-00 Rice cytosol 33.84 26.66
Os02t0271600-00 Rice cytosol, peroxisome, plastid 33.65 26.15
Os04t0121300-00 Rice cytosol 35.37 25.38
Os03t0158700-01 Rice cytosol, endoplasmic reticulum, extracellular 38.81 25.34
Os01t0794800-01 Rice mitochondrion 34.23 24.29
Os01t0795100-00 Rice extracellular 34.03 24.18
Os02t0271000-01 Rice extracellular 34.03 24.12
Os04t0121100-01 Rice extracellular 34.03 23.67
Os01t0795000-01 Rice extracellular, plasma membrane 32.5 23.1
Os02t0270900-00 Rice extracellular, plasma membrane 25.62 21.37
Os01t0795200-01 Rice extracellular, vacuole 29.45 21.33
Os02t0270200-01 Rice extracellular, plasma membrane 13.38 14.11
Os01t0795400-01 Rice extracellular, golgi 8.8 12.27
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1ProteinID:BAH94625.1ProteinID:BAT08663.1
UniProt:C7J6W5GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0019538InterPro:IPR036852EnsemblPlantsGene:Os09g0482660EnsemblPlants:Os09t0482660-01
InterPro:PA_domainPFAM:PF00082PFAM:PF02225ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF520
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASSUPFAM:SSF52743UniParc:UPI0001B65CD2SEG:seg
Description
Similar to Subtilisin-type protease. (Os09t0482660-01)
Coordinates
chr9:-:18558471..18561002
Molecular Weight (calculated)
53206.5 Da
IEP (calculated)
5.106
GRAVY (calculated)
0.092
Length
523 amino acids
Sequence
(BLAST)
001: CSGEGCAGSA ILAGFDDAVA DGVDVISVSL GASPYFRPDF SDDPIAIGSF HAVAKGIMVV CSAGNAGPDA ATVVNAAPWI LTVAASTIDR YFQSDVVLGG
101: NNTAVKGGAI NFSNLNKSPK YPLITGESAK SSSVSDTESA SHCEPGTLDA SKIKGKIVLC HHSRNSDTPK TEKVGELKSA GAVGAVLVDD LEKAVATAYI
201: DFPVTEITSN AAADIHKYIS STSEPVVTIT PTITVTEYKP APVVAYFSSR GPSPQTPNIL KPDVAAPGVN ILASWIPTST LPAGEEKPSQ FNLVSGTSMA
301: CPHVAGAAAA VRAWNPAWSP AAIRSAIMTT AAQLNNDGAA VTTDSGSPAT PYDHGAGQVN PAAALDAGLV YELGEEDYLQ FLCDYGYDAS QIKLVAASLP
401: GGFSCGAGGN ASDSKDLISG LNYPSIAVTG LGKAGGTRTV SRVVTNVGAQ QEATYTVAVA APAGLDVKVV PGKLEFTKSV KKLGFQVSFS GKNAAAAAKG
501: DLFGSITWSD GKHTVRSPFV VTI
Best Arabidopsis Sequence Match ( AT1G20160.2 )
(BLAST)
001: MGSASSAANA NRAQILINTM FKRRANDLLH TYKHGFSGFA ARLTAEEAKV IAKKPGVVSV FPDPHFQLHT THSWDFLKYQ TSVKVDSGPP SSASDGSYDS
101: IVGILDTGIW PESESFNDKD MGPIPSRWKG TCMEAKDFKS SNCNRKIIGA RYYKNPDDDS EYYTTRDVIG HGSHVSSTIA GSAVENASYY GVASGTAKGG
201: SQNARIAMYK VCNPGGCTGS SILAAFDDAI ADGVDVLSLS LGAPAYARID LNTDPIAIGA FHAVEQGILV ICSAGNDGPD GGTVTNTAPW IMTVAANTID
301: RDFESDVVLG GNKVIKGEGI HFSNVSKSPV YPLIHGKSAK SADASEGSAR ACDSDSLDQE KVKGKIVLCE NVGGSYYASS ARDEVKSKGG TGCVFVDDRT
401: RAVASAYGSF PTTVIDSKEA AEIFSYLNST KDPVATILPT ATVEKFTPAP AVAYFSSRGP SSLTRSILKP DITAPGVSIL AAWTGNDSSI SLEGKPASQY
501: NVISGTSMAA PHVSAVASLI KSQHPTWGPS AIRSAIMTTA TQTNNDKGLI TTETGATATP YDSGAGELSS TASMQPGLVY ETTETDYLNF LCYYGYNVTT
601: IKAMSKAFPE NFTCPADSNL DLISTINYPS IGISGFKGNG SKTVTRTVTN VGEDGEAVYT VSVETPPGFN IQVTPEKLQF TKDGEKLTYQ VIVSATASLK
701: QDVFGALTWS NAKYKVRSPI VISSESSRTN
Arabidopsis Description
CRSPCO(2)-response secreted protease [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.